About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_004544-T1HELICASE WITH DEATH DOMAIN-RELATED
LLU|FUN_004545-T1
LLU|FUN_004546-T1
LLU|FUN_004547-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
LLU|FUN_004548-T160S RIBOSOMAL PROTEIN L35A
LLU|FUN_004549-T1
LLU|FUN_004550-T1
LLU|FUN_004551-T1
LLU|FUN_004552-T1
LLU|FUN_004553-T1
LLU|FUN_004554-T1
LLU|FUN_004555-T1
LLU|FUN_004556-T1
LLU|FUN_004557-T1
LLU|FUN_004558-T1
LLU|FUN_004559-T1
LLU|FUN_004560-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_004561-T1
LLU|FUN_004562-T1
LLU|FUN_004563-T1
LLU|FUN_004564-T1
LLU|FUN_004565-T1
LLU|FUN_004566-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_004567-T1
LLU|FUN_004568-T1
LLU|FUN_004569-T1
LLU|FUN_004570-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_004571-T1
LLU|FUN_004572-T1E3 UBIQUITIN-PROTEIN LIGASE HECTD3
LLU|FUN_004573-T1
LLU|FUN_004574-T1ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE
LLU|FUN_004575-T1ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE
LLU|FUN_004576-T1
LLU|FUN_004577-T1DISCS LARGE
LLU|FUN_004578-T1MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
LLU|FUN_004579-T1
LLU|FUN_004580-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
LLU|FUN_004581-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
LLU|FUN_004582-T1
LLU|FUN_004583-T1TOLL-LIKE RECEPTOR
LLU|FUN_004584-T1PREFOLDIN SUBUNIT 2
LLU|FUN_004585-T1PROLINE AND SERINE-RICH PROTEIN 3
LLU|FUN_004586-T1
LLU|FUN_004587-T1
LLU|FUN_004588-T1
LLU|FUN_004589-T1
LLU|FUN_004590-T1
LLU|FUN_004591-T1
LLU|FUN_004592-T1HOMEO BOX HB9 LIKE A-RELATED
LLU|FUN_004593-T1PROTEIN CBG15099
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