About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_004494-T1
LLU|FUN_004495-T1
LLU|FUN_004496-T1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
LLU|FUN_004497-T1ETS
LLU|FUN_004498-T1
LLU|FUN_004499-T1HOMEOBOX PROTEIN ARISTALESS
LLU|FUN_004500-T1SI:CH211-171H4.7-RELATED
LLU|FUN_004501-T1
LLU|FUN_004502-T1
LLU|FUN_004503-T1
LLU|FUN_004504-T1
LLU|FUN_004505-T1
LLU|FUN_004506-T1FI23527P1
LLU|FUN_004507-T1FI23527P1
LLU|FUN_004508-T1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21
LLU|FUN_004509-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_004510-T1
LLU|FUN_004511-T1FI23527P1
LLU|FUN_004512-T1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
LLU|FUN_004513-T1GUANYLYL CYCLASE
LLU|FUN_004514-T1
LLU|FUN_004515-T1
LLU|FUN_004516-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_004517-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_004518-T1SUGAR HYDROLASE-RELATED
LLU|FUN_004519-T1
LLU|FUN_004520-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_004521-T1
LLU|FUN_004522-T1
LLU|FUN_004523-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_004524-T1
LLU|FUN_004525-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_004526-T1
LLU|FUN_004527-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_004528-T1NHL REPEAT-CONTAINING PROTEIN-RELATED
LLU|FUN_004529-T1
LLU|FUN_004530-T1
LLU|FUN_004531-T1
LLU|FUN_004532-T1
LLU|FUN_004533-T1
LLU|FUN_004534-T1
LLU|FUN_004535-T1AMINO ACID TRANSPORTER
LLU|FUN_004536-T1
LLU|FUN_004537-T1FATTY ACID SYNTHASE
LLU|FUN_004538-T1FATTY ACID SYNTHASE
LLU|FUN_004539-T1PATCHED-RELATED
LLU|FUN_004540-T1PATCHED-RELATED
LLU|FUN_004541-T1PATCHED-RELATED
LLU|FUN_004542-T1
LLU|FUN_004543-T1FATTY ACID SYNTHASE
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