About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_004189-T1STEROL ISOMERASE
LLU|FUN_004190-T1IMPORTIN ALPHA
LLU|FUN_004191-T1
LLU|FUN_004192-T1
LLU|FUN_004193-T1
LLU|FUN_004194-T1PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
LLU|FUN_004195-T1
LLU|FUN_004196-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_004197-T1
LLU|FUN_004198-T1
LLU|FUN_004199-T1
LLU|FUN_004200-T1
LLU|FUN_004201-T1GLUTAREDOXIN FAMILY MEMBER
LLU|FUN_004202-T1ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_004203-T1HEDGEHOG-INTERACTING PROTEIN
LLU|FUN_004204-T1
LLU|FUN_004205-T1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
LLU|FUN_004206-T1ENOYL-COA HYDRATASE
LLU|FUN_004207-T1
LLU|FUN_004208-T1DYNEIN REGULATORY COMPLEX PROTEIN 8
LLU|FUN_004209-T1
LLU|FUN_004210-T1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
LLU|FUN_004211-T1ADENOSINE/GUANOSINE DIPHOSPHATASE
LLU|FUN_004212-T1COILED-COIL DOMAIN-CONTAINING 166
LLU|FUN_004213-T1GLYCOSYLTRANSFERASE-RELATED
LLU|FUN_004214-T1
LLU|FUN_004215-T1
LLU|FUN_004216-T1DEAD-BOX ATP-DEPENDENT RNA HELICASE 50
LLU|FUN_004217-T1BRISC AND BRCA1-A COMPLEX MEMBER 2
LLU|FUN_004218-T1GDP-D-GLUCOSE PHOSPHORYLASE 1
LLU|FUN_004219-T1
LLU|FUN_004220-T1AP COMPLEX SUBUNIT MU
LLU|FUN_004221-T1
LLU|FUN_004222-T1
LLU|FUN_004223-T11-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED
LLU|FUN_004224-T1AUTOPHAGY-RELATED 2, ISOFORM A
LLU|FUN_004225-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_004226-T1AUTOPHAGY-RELATED 2, ISOFORM A
LLU|FUN_004227-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_004228-T1
LLU|FUN_004229-T1
LLU|FUN_004230-T1
LLU|FUN_004231-T1
LLU|FUN_004232-T1
LLU|FUN_004233-T1
LLU|FUN_004234-T1VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL
LLU|FUN_004235-T1VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL
LLU|FUN_004236-T1
LLU|FUN_004237-T1
LLU|FUN_004238-T1CLE
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