About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_004139-T1PARTITIONING DEFECTIVE 3 RELATED
LLU|FUN_004140-T1
LLU|FUN_004141-T1TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE
LLU|FUN_004142-T1
LLU|FUN_004143-T1
LLU|FUN_004144-T1
LLU|FUN_004145-T1
LLU|FUN_004146-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_004147-T1
LLU|FUN_004148-T1PELOTA
LLU|FUN_004149-T1PROTEIN KINASE RELATED
LLU|FUN_004150-T1
LLU|FUN_004151-T1
LLU|FUN_004152-T1
LLU|FUN_004153-T1PROTEIN KINASE RELATED
LLU|FUN_004154-T1XPA-BINDING PROTEIN 1-RELATED
LLU|FUN_004155-T1
LLU|FUN_004156-T1CARBONIC ANHYDRASE
LLU|FUN_004157-T1RP42 RELATED
LLU|FUN_004158-T1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
LLU|FUN_004159-T120 KD NUCLEAR CAP BINDING PROTEIN
LLU|FUN_004160-T1MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT
LLU|FUN_004161-T1MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT
LLU|FUN_004162-T1INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
LLU|FUN_004163-T1INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
LLU|FUN_004164-T1PROTEIN IWS1 HOMOLOG
LLU|FUN_004165-T1
LLU|FUN_004166-T1NHL REPEAT-CONTAINING PROTEIN-RELATED
LLU|FUN_004167-T1
LLU|FUN_004168-T1
LLU|FUN_004169-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_004170-T1
LLU|FUN_004171-T1NEUROPEPTIDES RECEPTOR
LLU|FUN_004172-T1CARBONYL REDUCTASE 1-RELATED
LLU|FUN_004173-T1ACTIVATOR OF S-PHASE KINASE-RELATED
LLU|FUN_004174-T1ARYLSULFATASE FAMILY MEMBER
LLU|FUN_004175-T1UNCHARACTERIZED
LLU|FUN_004176-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_004177-T1OS11G0677101 PROTEIN
LLU|FUN_004178-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_004179-T1
LLU|FUN_004180-T1RGD1565685 PROTEIN
LLU|FUN_004181-T1
LLU|FUN_004182-T1
LLU|FUN_004183-T1
LLU|FUN_004184-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_004185-T1
LLU|FUN_004186-T1UNCHARACTERIZED
LLU|FUN_004187-T1
LLU|FUN_004188-T1
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