About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_004239-T1
LLU|FUN_004240-T1
LLU|FUN_004241-T1
LLU|FUN_004242-T1
LLU|FUN_004243-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_004244-T1GLYCOSYLTRANSFERASE STELLO1-RELATED
LLU|FUN_004245-T1SODIUM-BILE ACID COTRANSPORTER
LLU|FUN_004246-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_004247-T1
LLU|FUN_004248-T1CD59 GLYCOPROTEIN
LLU|FUN_004249-T1
LLU|FUN_004250-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_004251-T1
LLU|FUN_004252-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_004253-T1
LLU|FUN_004254-T1
LLU|FUN_004255-T1FOLLISTATIN-RELATED
LLU|FUN_004256-T1LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
LLU|FUN_004257-T1
LLU|FUN_004258-T1
LLU|FUN_004259-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_004260-T1
LLU|FUN_004261-T1ANTIGEN BSP, PUTATIVE-RELATED
LLU|FUN_004262-T1IQ DOMAIN-CONTAINING PROTEIN H
LLU|FUN_004263-T1
LLU|FUN_004264-T1
LLU|FUN_004265-T1
LLU|FUN_004266-T1COLLAGEN ALPHA
LLU|FUN_004267-T1COLLAGEN ALPHA
LLU|FUN_004268-T1
LLU|FUN_004269-T1
LLU|FUN_004270-T1COLLAGEN ALPHA
LLU|FUN_004271-T1CYCLINS
LLU|FUN_004272-T1AQUAPORIN TRANSPORTER
LLU|FUN_004273-T1AQUAPORIN TRANSPORTER
LLU|FUN_004274-T1AMINO ACID TRANSPORTER
LLU|FUN_004275-T1AQUAPORIN TRANSPORTER
LLU|FUN_004276-T1
LLU|FUN_004277-T1AQUAPORIN TRANSPORTER
LLU|FUN_004278-T1AQUAPORIN TRANSPORTER
LLU|FUN_004279-T1
LLU|FUN_004280-T1
LLU|FUN_004281-T1
LLU|FUN_004282-T1
LLU|FUN_004283-T1
LLU|FUN_004284-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
LLU|FUN_004285-T1
LLU|FUN_004286-T1
LLU|FUN_004287-T1IQ DOMAIN-CONTAINING PROTEIN C
LLU|FUN_004288-T1
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