About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_004089-T1TRANSDUCER OF ERBB2 TOB
LLU|FUN_004090-T1
LLU|FUN_004091-T1
LLU|FUN_004092-T1
LLU|FUN_004093-T1
LLU|FUN_004094-T1
LLU|FUN_004095-T1
LLU|FUN_004096-T1CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN
LLU|FUN_004097-T1
LLU|FUN_004098-T1COENZYME Q10 BIOSYNTHESIS PROTEIN 7
LLU|FUN_004099-T1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
LLU|FUN_004100-T1
LLU|FUN_004101-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_004102-T1
LLU|FUN_004103-T1TYROSINASE FAMILY MEMBER
LLU|FUN_004104-T1TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4
LLU|FUN_004105-T1TRANSLATION ELONGATION FACTOR-RELATED
LLU|FUN_004106-T1GOLGIN
LLU|FUN_004107-T1
LLU|FUN_004108-T1
LLU|FUN_004109-T1
LLU|FUN_004110-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_004111-T11-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
LLU|FUN_004112-T1
LLU|FUN_004113-T1
LLU|FUN_004114-T1
LLU|FUN_004115-T1
LLU|FUN_004116-T1TETRASPANIN
LLU|FUN_004117-T1
LLU|FUN_004118-T1
LLU|FUN_004119-T1
LLU|FUN_004120-T1TETRASPANIN
LLU|FUN_004121-T1
LLU|FUN_004122-T1TETRASPANIN
LLU|FUN_004123-T1
LLU|FUN_004124-T1
LLU|FUN_004125-T1
LLU|FUN_004126-T1
LLU|FUN_004127-T1UBIQUITINATION FACTOR E4
LLU|FUN_004128-T1
LLU|FUN_004129-T1AUGMIN FAMILY MEMBER
LLU|FUN_004130-T1
LLU|FUN_004131-T1PROMININ PROM PROTEIN
LLU|FUN_004132-T1PROMININ PROM PROTEIN
LLU|FUN_004133-T1
LLU|FUN_004134-T1PHOSPHATIDYLINOSITOL 4-KINASE TYPE-II
LLU|FUN_004135-T1PHOSPHATIDYLINOSITOL 4-KINASE TYPE-II
LLU|FUN_004136-T1TRANSCRIPTION ELONGATION REGULATOR 1
LLU|FUN_004137-T1
LLU|FUN_004138-T1TYROSINE-PROTEIN KINASE RECEPTOR
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