About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_004694-T1
LLU|FUN_004695-T1
LLU|FUN_004696-T1
LLU|FUN_004697-T1ENDO BETA N-ACETYLGLUCOSAMINIDASE
LLU|FUN_004698-T1
LLU|FUN_004699-T1POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
LLU|FUN_004700-T1UNCHARACTERIZED
LLU|FUN_004701-T1
LLU|FUN_004702-T1UNCHARACTERIZED
LLU|FUN_004703-T1
LLU|FUN_004704-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_004705-T1METHYLTRANSFERASE, FKBM FAMILY PROTEIN
LLU|FUN_004706-T1
LLU|FUN_004707-T1
LLU|FUN_004708-T1
LLU|FUN_004709-T1
LLU|FUN_004710-T1
LLU|FUN_004711-T1
LLU|FUN_004712-T1
LLU|FUN_004713-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_004714-T1
LLU|FUN_004715-T1
LLU|FUN_004716-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_004717-T1
LLU|FUN_004718-T1
LLU|FUN_004719-T1CYTOCHROME P450 20A1
LLU|FUN_004720-T1
LLU|FUN_004721-T1
LLU|FUN_004722-T1
LLU|FUN_004723-T1
LLU|FUN_004724-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
LLU|FUN_004725-T1MUCIN-17
LLU|FUN_004726-T1
LLU|FUN_004727-T1HEAT SHOCK PROTEIN 70KDA
LLU|FUN_004728-T1
LLU|FUN_004729-T1
LLU|FUN_004730-T1REGULATOR OF G PROTEIN SIGNALING
LLU|FUN_004731-T1
LLU|FUN_004732-T1
LLU|FUN_004733-T1
LLU|FUN_004734-T1
LLU|FUN_004735-T1
LLU|FUN_004736-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_004737-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31
LLU|FUN_004738-T1
LLU|FUN_004739-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_004740-T1UNCHARACTERIZED
LLU|FUN_004741-T1
LLU|FUN_004742-T1
LLU|FUN_004743-T1NEUROTRANSMITTER GATED ION CHANNEL
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