About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g13959COILED-COIL DOMAIN-CONTAINING PROTEIN 73
Clavulariidae_g1396RING-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g13960INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13961INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13962INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13963INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13964COILED-COIL DOMAIN-CONTAINING PROTEIN 73
Clavulariidae_g13965INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13966COILED-COIL DOMAIN-CONTAINING PROTEIN 73
Clavulariidae_g13967
Clavulariidae_g13968
Clavulariidae_g13969INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g1397PROTEIN CBG26694
Clavulariidae_g13970INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13971COILED-COIL DOMAIN-CONTAINING PROTEIN 73
Clavulariidae_g13972INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13973INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13974COILED-COIL DOMAIN-CONTAINING PROTEIN 73
Clavulariidae_g13975SOLUTE CARRIER FAMILY 35
Clavulariidae_g13976TYROSINE-PROTEIN KINASE RECEPTOR
Clavulariidae_g13977TYROSINE-PROTEIN KINASE RECEPTOR
Clavulariidae_g13978
Clavulariidae_g13979TYROSINE-PROTEIN KINASE RECEPTOR
Clavulariidae_g1398
Clavulariidae_g13980TYROSINE-PROTEIN KINASE RECEPTOR
Clavulariidae_g13981FI19480P1
Clavulariidae_g13982FI19480P1
Clavulariidae_g13983FI19480P1
Clavulariidae_g13984
Clavulariidae_g13985TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN
Clavulariidae_g13986TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN
Clavulariidae_g13987FI19480P1
Clavulariidae_g13988INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13989FI19480P1
Clavulariidae_g1399ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g13990INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13991FI19480P1
Clavulariidae_g13992
Clavulariidae_g13993INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13994PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g13995INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13996INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13997INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13998INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g13999INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g14SYNAPTOTAGMIN
Clavulariidae_g140ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1400SCHLAFEN
Clavulariidae_g14000INTERFERON-INDUCIBLE GTPASE
Clavulariidae_g14001INTERFERON-INDUCIBLE GTPASE
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