About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g9711
Clavulariidae_g9712TRANSPOSASE-RELATED
Clavulariidae_g9713REVERSE TRANSCRIPTASES
Clavulariidae_g9714
Clavulariidae_g9715DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g9716EXPRESSED PROTEIN
Clavulariidae_g9717EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
Clavulariidae_g9718
Clavulariidae_g9719
Clavulariidae_g972UNCHARACTERIZED
Clavulariidae_g9720
Clavulariidae_g9721
Clavulariidae_g9722TRANSPOSABLE ELEMENT-RELATED
Clavulariidae_g9723
Clavulariidae_g9724
Clavulariidae_g9725RETROTRANSPOSON
Clavulariidae_g9726
Clavulariidae_g9727RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9728REVERSE TRANSCRIPTASES
Clavulariidae_g9729
Clavulariidae_g973MADF DOMAIN TRANSCRIPTION FACTOR
Clavulariidae_g9730
Clavulariidae_g9731UNCHARACTERIZED
Clavulariidae_g9732
Clavulariidae_g9733
Clavulariidae_g9734-
Clavulariidae_g9735
Clavulariidae_g9736EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
Clavulariidae_g9737EXPRESSED PROTEIN
Clavulariidae_g9738EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
Clavulariidae_g9739
Clavulariidae_g974ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9740
Clavulariidae_g9741
Clavulariidae_g9742
Clavulariidae_g9743
Clavulariidae_g9744TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g9745
Clavulariidae_g9746SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g9747ZGC:195170
Clavulariidae_g9748
Clavulariidae_g9749REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g975
Clavulariidae_g9750TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g9751
Clavulariidae_g9752EXPRESSED PROTEIN
Clavulariidae_g9753
Clavulariidae_g9754
Clavulariidae_g9755EXPRESSED PROTEIN
Clavulariidae_g9756EXPRESSED PROTEIN
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