About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g9441
Clavulariidae_g9442
Clavulariidae_g9443EXPRESSED PROTEIN
Clavulariidae_g9444
Clavulariidae_g9445TRANSPOSASE
Clavulariidae_g9446
Clavulariidae_g9447
Clavulariidae_g9448
Clavulariidae_g9449REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g945
Clavulariidae_g9450
Clavulariidae_g9451
Clavulariidae_g9452
Clavulariidae_g9453
Clavulariidae_g9454HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Clavulariidae_g9455HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Clavulariidae_g9456HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Clavulariidae_g9457
Clavulariidae_g9458EXPRESSED PROTEIN
Clavulariidae_g9459
Clavulariidae_g946DUF3504 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9460
Clavulariidae_g9461
Clavulariidae_g9462ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Clavulariidae_g9463
Clavulariidae_g9464
Clavulariidae_g9465TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g9466
Clavulariidae_g9467PROTEIN CBG26694
Clavulariidae_g9468DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g9469
Clavulariidae_g947ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9470
Clavulariidae_g9471
Clavulariidae_g9472PROTEIN CBG26694
Clavulariidae_g9473
Clavulariidae_g9474EXPRESSED PROTEIN
Clavulariidae_g9475
Clavulariidae_g9476
Clavulariidae_g9477OSJNBA0013A04.12 PROTEIN
Clavulariidae_g9478
Clavulariidae_g9479
Clavulariidae_g948
Clavulariidae_g9480DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g9481ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9482ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g9483SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g9484TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g9485PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9486EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
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