About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g9216
Clavulariidae_g9217
Clavulariidae_g9218
Clavulariidae_g9219
Clavulariidae_g922REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9220
Clavulariidae_g9221
Clavulariidae_g9222
Clavulariidae_g9223
Clavulariidae_g9224
Clavulariidae_g9225
Clavulariidae_g9226
Clavulariidae_g9227
Clavulariidae_g9228
Clavulariidae_g9229
Clavulariidae_g923REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9230
Clavulariidae_g9231
Clavulariidae_g9232
Clavulariidae_g9233
Clavulariidae_g9234
Clavulariidae_g9235
Clavulariidae_g9236
Clavulariidae_g9237
Clavulariidae_g9238
Clavulariidae_g9239
Clavulariidae_g924SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g9240
Clavulariidae_g9241
Clavulariidae_g9242
Clavulariidae_g9243
Clavulariidae_g9244
Clavulariidae_g9245
Clavulariidae_g9246
Clavulariidae_g9247
Clavulariidae_g9248
Clavulariidae_g9249
Clavulariidae_g925
Clavulariidae_g9250
Clavulariidae_g9251
Clavulariidae_g9252
Clavulariidae_g9253
Clavulariidae_g9254
Clavulariidae_g9255
Clavulariidae_g9256
Clavulariidae_g9257
Clavulariidae_g9258
Clavulariidae_g9259
Clavulariidae_g926REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9260
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