About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g8992
Clavulariidae_g8993
Clavulariidae_g8994
Clavulariidae_g8995
Clavulariidae_g8996
Clavulariidae_g8997
Clavulariidae_g8998
Clavulariidae_g8999
Clavulariidae_g9SYNAPTOTAGMIN
Clavulariidae_g90PROTEIN CBG26694
Clavulariidae_g900TRANSPOSASE
Clavulariidae_g9000
Clavulariidae_g9001
Clavulariidae_g9002
Clavulariidae_g9003
Clavulariidae_g9004
Clavulariidae_g9005
Clavulariidae_g9006
Clavulariidae_g9007
Clavulariidae_g9008
Clavulariidae_g9009
Clavulariidae_g901ATP-DEPENDENT DNA HELICASE
Clavulariidae_g9010
Clavulariidae_g9011
Clavulariidae_g9012
Clavulariidae_g9013
Clavulariidae_g9014
Clavulariidae_g9015
Clavulariidae_g9016
Clavulariidae_g9017
Clavulariidae_g9018
Clavulariidae_g9019
Clavulariidae_g902DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9020
Clavulariidae_g9021
Clavulariidae_g9022
Clavulariidae_g9023
Clavulariidae_g9024
Clavulariidae_g9025
Clavulariidae_g9026
Clavulariidae_g9027
Clavulariidae_g9028
Clavulariidae_g9029
Clavulariidae_g903INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9030
Clavulariidae_g9031
Clavulariidae_g9032
Clavulariidae_g9033
Clavulariidae_g9034
Clavulariidae_g9035
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