About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 709 710 711 712 713 714 715 716 717 718 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g9531
Clavulariidae_g9532DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g9533
Clavulariidae_g9534RETROTRANSPOSON
Clavulariidae_g9535RETROTRANSPOSON
Clavulariidae_g9536DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g9537
Clavulariidae_g9538
Clavulariidae_g9539
Clavulariidae_g954
Clavulariidae_g9540
Clavulariidae_g9541
Clavulariidae_g9542REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9543SI:DKEY-29D5.2
Clavulariidae_g9544
Clavulariidae_g9545
Clavulariidae_g9546SIMILAR TO RIKEN CDNA E130308A19
Clavulariidae_g9547PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9548REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9549ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g955DNA HELICASE RECQ FAMILY MEMBER
Clavulariidae_g9550RETROTRANSPOSON
Clavulariidae_g9551RETROTRANSPOSON
Clavulariidae_g9552TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g9553
Clavulariidae_g9554REVERSE TRANSCRIPTASES
Clavulariidae_g9555
Clavulariidae_g9556PROTEIN CBG26694
Clavulariidae_g9557ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9558OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Clavulariidae_g9559
Clavulariidae_g956
Clavulariidae_g9560
Clavulariidae_g9561
Clavulariidae_g9562
Clavulariidae_g9563RETROTRANSPOSON
Clavulariidae_g9564
Clavulariidae_g9565ATP-DEPENDENT DNA HELICASE
Clavulariidae_g9566ATP-DEPENDENT DNA HELICASE
Clavulariidae_g9567EXPRESSED PROTEIN
Clavulariidae_g9568SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g9569F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g957PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9570
Clavulariidae_g9571
Clavulariidae_g9572HMG DOMAIN-CONTAINING PROTEIN 3
Clavulariidae_g9573CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g9574
Clavulariidae_g9575
Clavulariidae_g9576COLLAGEN ALPHA
TOP