About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_029339-T1SOLUTE CARRIER FAMILY 13 MEMBER
LLU|FUN_029340-T1SOLUTE CARRIER FAMILY 13 MEMBER
LLU|FUN_029341-T1
LLU|FUN_029342-T1
LLU|FUN_029343-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_029344-T1
LLU|FUN_029345-T1
LLU|FUN_029346-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_029347-T1PROTEIN CBG12054-RELATED
LLU|FUN_029348-T1
LLU|FUN_029349-T1
LLU|FUN_029350-T1KH DOMAIN CONTAINING RNA BINDING PROTEIN
LLU|FUN_029351-T1
LLU|FUN_029352-T1ACYL-COA-BINDING PROTEIN, ACBP
LLU|FUN_029353-T1
LLU|FUN_029354-T1SYNAPTOSOMAL ASSOCIATED PROTEIN
LLU|FUN_029355-T1
LLU|FUN_029356-T1TGF-BETA FAMILY
LLU|FUN_029357-T1
LLU|FUN_029358-T1HEPARAN SULFATE SULFOTRANSFERASE
LLU|FUN_029359-T1CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P
LLU|FUN_029360-T1DNAJ HOMOLOG SUBFAMILY B MEMBER 2
LLU|FUN_029361-T1
LLU|FUN_029362-T1
LLU|FUN_029363-T1MOLTING PROTEIN MLT-4
LLU|FUN_029364-T1
LLU|FUN_029365-T1
LLU|FUN_029366-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_029367-T1
LLU|FUN_029368-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_029369-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_029370-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_029371-T1HEPARAN SULFATE SULFOTRANSFERASE
LLU|FUN_029372-T1
LLU|FUN_029373-T1BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2
LLU|FUN_029374-T1PALMITOYLTRANSFERASE ZDHHC16
LLU|FUN_029375-T1
LLU|FUN_029376-T1ACROSIN-RELATED
LLU|FUN_029377-T1
LLU|FUN_029378-T1LD44762P
LLU|FUN_029379-T1
LLU|FUN_029380-T1
LLU|FUN_029381-T1
LLU|FUN_029382-T1RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
LLU|FUN_029383-T1ENDONUCLEASE III-LIKE PROTEIN 1
LLU|FUN_029384-T1
LLU|FUN_029385-T1
LLU|FUN_029386-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_029387-T1
LLU|FUN_029388-T1METHYLTRANSFERASE, FKBM FAMILY PROTEIN
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