About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_029139-T1
LLU|FUN_029140-T1PROMININ PROM PROTEIN
LLU|FUN_029141-T1
LLU|FUN_029142-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_029143-T1
LLU|FUN_029144-T1
LLU|FUN_029145-T1POLYCOMB GROUP PROTEIN
LLU|FUN_029146-T1NADH-UBIQUINONE OXIDOREDUCTASE B15 SUBUNIT
LLU|FUN_029147-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_029148-T1S-ADENOSYLMETHIONINE DECARBOXYLASE
LLU|FUN_029149-T1S-ADENOSYLMETHIONINE DECARBOXYLASE
LLU|FUN_029150-T1CITRATE LYASE SUBUNIT BETA-RELATED
LLU|FUN_029151-T1
LLU|FUN_029152-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
LLU|FUN_029153-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
LLU|FUN_029154-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
LLU|FUN_029155-T1MIDASIN-RELATED
LLU|FUN_029156-T1
LLU|FUN_029157-T1MIDASIN-RELATED
LLU|FUN_029158-T1MIDASIN-RELATED
LLU|FUN_029159-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_029160-T1MIDASIN-RELATED
LLU|FUN_029161-T1MIDASIN-RELATED
LLU|FUN_029162-T1
LLU|FUN_029163-T1
LLU|FUN_029164-T1SETA BINDING PROTEIN 1
LLU|FUN_029165-T1CDC37-RELATED
LLU|FUN_029166-T1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
LLU|FUN_029167-T1E3 UFM1-PROTEIN LIGASE 1
LLU|FUN_029168-T1
LLU|FUN_029169-T1
LLU|FUN_029170-T1TESTIS EXPRESSED 11
LLU|FUN_029171-T1
LLU|FUN_029172-T1TESTIS EXPRESSED 11
LLU|FUN_029173-T1FORKHEAD BOX PROTEIN O
LLU|FUN_029174-T1FORKHEAD BOX PROTEIN O
LLU|FUN_029175-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_029176-T1
LLU|FUN_029177-T1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
LLU|FUN_029178-T1
LLU|FUN_029179-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_029180-T1DUMPY: SHORTER THAN WILD-TYPE
LLU|FUN_029181-T1
LLU|FUN_029182-T1BESTROPHIN
LLU|FUN_029183-T1CCR4 NOT-RELATED
LLU|FUN_029184-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
LLU|FUN_029185-T1-
LLU|FUN_029186-T1-
LLU|FUN_029187-T1-
LLU|FUN_029188-T1-
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