About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_028988-T1PROTEIN FAM91A1
LLU|FUN_028989-T1SREK1IP1 FAMILY MEMBER
LLU|FUN_028990-T1F-BOX ONLY PROTEIN 33
LLU|FUN_028991-T1
LLU|FUN_028992-T1RETICULOCALBIN
LLU|FUN_028993-T1
LLU|FUN_028994-T1
LLU|FUN_028995-T1
LLU|FUN_028996-T1AGAP008170-PA
LLU|FUN_028997-T1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
LLU|FUN_028998-T1
LLU|FUN_028999-T1UNCHARACTERIZED
LLU|FUN_029000-T1
LLU|FUN_029001-T1
LLU|FUN_029002-T1
LLU|FUN_029003-T1
LLU|FUN_029004-T1COLLAGEN ALPHA
LLU|FUN_029005-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_029006-T1
LLU|FUN_029007-T1CALCIUM-TRANSPORTING ATPASE
LLU|FUN_029009-T1
LLU|FUN_029010-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_029011-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 30
LLU|FUN_029012-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_029013-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_029014-T1STEREOCILIN RELATED
LLU|FUN_029015-T1
LLU|FUN_029016-T1
LLU|FUN_029017-T1
LLU|FUN_029018-T1
LLU|FUN_029019-T1CYTOCHROME C OXIDASE SUBUNIT 6B
LLU|FUN_029020-T1UNCHARACTERIZED
LLU|FUN_029021-T1
LLU|FUN_029022-T1
LLU|FUN_029023-T1
LLU|FUN_029024-T1
LLU|FUN_029025-T1NUCLEOLAR COMPLEX PROTEIN 3
LLU|FUN_029026-T1LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
LLU|FUN_029027-T1UNCHARACTERIZED
LLU|FUN_029028-T1UNCHARACTERIZED
LLU|FUN_029029-T1MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED
LLU|FUN_029030-T1RGD1565685 PROTEIN
LLU|FUN_029031-T1
LLU|FUN_029032-T1
LLU|FUN_029033-T1
LLU|FUN_029034-T1AGAP007547-PA
LLU|FUN_029035-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_029036-T1CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
LLU|FUN_029037-T1GRPE PROTEIN
LLU|FUN_029038-T1METHYLTRANSFERASE
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