About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_029039-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_029040-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_029041-T1
LLU|FUN_029042-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_029043-T1
LLU|FUN_029044-T1
LLU|FUN_029045-T1
LLU|FUN_029046-T1DEDICATOR OF CYTOKINESIS DOCK
LLU|FUN_029047-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_029048-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71
LLU|FUN_029049-T1LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN
LLU|FUN_029050-T1TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2
LLU|FUN_029051-T1ASTEROID PROTEIN
LLU|FUN_029052-T1
LLU|FUN_029053-T1UNCHARACTERIZED
LLU|FUN_029054-T1ASTEROID PROTEIN
LLU|FUN_029055-T1ELONGATION FACTOR TU-RELATED
LLU|FUN_029056-T15'->3' EXORIBONUCLEASE
LLU|FUN_029057-T1WD REPEAT CONTAINING PROTEIN 3 WDR3
LLU|FUN_029058-T1
LLU|FUN_029059-T1APONTIC
LLU|FUN_029060-T1WD REPEAT CONTAINING PROTEIN 3 WDR3
LLU|FUN_029061-T1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
LLU|FUN_029062-T1
LLU|FUN_029063-T1TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED
LLU|FUN_029064-T1
LLU|FUN_029065-T1
LLU|FUN_029066-T1
LLU|FUN_029067-T1
LLU|FUN_029068-T1MORTALITY FACTOR 4-LIKE PROTEIN
LLU|FUN_029069-T1CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A
LLU|FUN_029070-T1
LLU|FUN_029071-T1NUDIX HYDROLASE, NUDC SUBFAMILY
LLU|FUN_029072-T1RNA POLYMERASE III DNA DIRECTED -RELATED
LLU|FUN_029073-T1MOLYBDOPTERIN SYNTHASE RELATED
LLU|FUN_029074-T1MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT
LLU|FUN_029075-T1CONTACTIN 5
LLU|FUN_029076-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_029077-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_029078-T1
LLU|FUN_029079-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_029080-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_029081-T1
LLU|FUN_029082-T1GLYCOSYLTRANSFERASE
LLU|FUN_029083-T1
LLU|FUN_029084-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_029085-T1
LLU|FUN_029086-T1
LLU|FUN_029087-T1TITIN
LLU|FUN_029088-T1
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