About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_028686-T1IMMUNOGLOBULIN
LLU|FUN_028687-T1
LLU|FUN_028688-T1THAP DOMAIN-CONTAINING
LLU|FUN_028689-T1
LLU|FUN_028690-T1
LLU|FUN_028691-T1CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
LLU|FUN_028692-T1DNA REPAIR PROTEIN XRCC4
LLU|FUN_028693-T1RAS-RELATED PROTEIN RAB
LLU|FUN_028694-T1
LLU|FUN_028695-T1PROTEIN DISPATCHED-RELATED
LLU|FUN_028696-T1
LLU|FUN_028697-T1
LLU|FUN_028698-T1
LLU|FUN_028699-T1
LLU|FUN_028700-T1
LLU|FUN_028701-T1
LLU|FUN_028702-T1GUANYLYL CYCLASE
LLU|FUN_028703-T1GUANYLYL CYCLASE
LLU|FUN_028704-T1TEX261 PROTEIN
LLU|FUN_028705-T1L-SERYL-TRNA(SEC) KINASE
LLU|FUN_028706-T1PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1
LLU|FUN_028707-T1LIMBIN/ELLIS-VAN CREVELD PROTEIN
LLU|FUN_028708-T1LIMBIN/ELLIS-VAN CREVELD PROTEIN
LLU|FUN_028709-T1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
LLU|FUN_028710-T1NEURALIZED
LLU|FUN_028711-T1
LLU|FUN_028712-T1
LLU|FUN_028713-T1
LLU|FUN_028714-T1
LLU|FUN_028715-T1CENTROMERE PROTEIN E
LLU|FUN_028716-T1
LLU|FUN_028717-T1
LLU|FUN_028718-T1
LLU|FUN_028719-T1
LLU|FUN_028720-T1EPITHELIAL MEMBRANE PROTEIN-RELATED
LLU|FUN_028721-T1
LLU|FUN_028722-T1
LLU|FUN_028723-T1
LLU|FUN_028724-T1EPITHELIAL MEMBRANE PROTEIN-RELATED
LLU|FUN_028725-T1ALMS1-RELATED
LLU|FUN_028726-T1
LLU|FUN_028727-T1ATP-DEPENDENT RNA AND DNA HELICASE
LLU|FUN_028728-T1
LLU|FUN_028729-T1ACTIN-BINDING LIM PROTEIN
LLU|FUN_028730-T1
LLU|FUN_028731-T1
LLU|FUN_028732-T1
LLU|FUN_028733-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_028734-T1
LLU|FUN_028735-T1
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