About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_028636-T1
LLU|FUN_028637-T1
LLU|FUN_028638-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
LLU|FUN_028639-T1CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
LLU|FUN_028640-T1
LLU|FUN_028641-T1
LLU|FUN_028642-T1POLYCOMB GROUP PROTEIN
LLU|FUN_028643-T1
LLU|FUN_028644-T1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN
LLU|FUN_028645-T1TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER
LLU|FUN_028646-T1NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED
LLU|FUN_028647-T1DUAL OXIDASE 2
LLU|FUN_028648-T1
LLU|FUN_028649-T1
LLU|FUN_028650-T1
LLU|FUN_028651-T1MOLTING PROTEIN MLT-4
LLU|FUN_028652-T1ALLOGRAFT INFLAMMATORY FACTOR-1
LLU|FUN_028653-T1MYOTROPHIN
LLU|FUN_028654-T1BA1-643
LLU|FUN_028655-T1CHROMOSOME 19 C19ORF81 HOMOLOG
LLU|FUN_028656-T1
LLU|FUN_028657-T1
LLU|FUN_028658-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_028659-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_028660-T1FANCONI ANEMIA GROUP G PROTEIN FAMILY MEMBER
LLU|FUN_028661-T1PROTEIN TFG
LLU|FUN_028662-T1U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10
LLU|FUN_028663-T1
LLU|FUN_028664-T1FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 100
LLU|FUN_028665-T1
LLU|FUN_028666-T1
LLU|FUN_028667-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_028668-T1ANTIGEN BSP, PUTATIVE-RELATED
LLU|FUN_028669-T1AGAP008170-PA
LLU|FUN_028670-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_028671-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_028672-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_028673-T1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
LLU|FUN_028674-T1
LLU|FUN_028675-T160S RIBOSOMAL PROTEIN L21
LLU|FUN_028676-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_028677-T1MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23
LLU|FUN_028678-T1
LLU|FUN_028679-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_028680-T1
LLU|FUN_028681-T1
LLU|FUN_028682-T1
LLU|FUN_028683-T1
LLU|FUN_028684-T1PROTEIN FAM199X
LLU|FUN_028685-T1MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
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