About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_028379-T1
LLU|FUN_028380-T1WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER
LLU|FUN_028381-T1SMALL NUCLEAR RIBONUCLEOPROTEIN SM
LLU|FUN_028382-T1UNCHARACTERIZED
LLU|FUN_028383-T1CASEIN KINASE II SUBUNIT ALPHA
LLU|FUN_028384-T1ORF PROTEIN
LLU|FUN_028385-T1
LLU|FUN_028386-T1RHOPHILIN
LLU|FUN_028387-T1PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER
LLU|FUN_028388-T1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S22
LLU|FUN_028389-T1MYOSIN LIGHT CHAIN 1, 3
LLU|FUN_028390-T1OTU DOMAIN CONTAINING PROTEIN
LLU|FUN_028391-T1TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4
LLU|FUN_028392-T1STAR-RELATED LIPID TRANSFER PROTEIN 9
LLU|FUN_028393-T1UNCHARACTERIZED
LLU|FUN_028394-T1BICOID-INTERACTING PROTEIN RELATED
LLU|FUN_028395-T1
LLU|FUN_028396-T1
LLU|FUN_028397-T1
LLU|FUN_028398-T1
LLU|FUN_028399-T1RAN GUANINE NUCLEOTIDE RELEASE FACTOR
LLU|FUN_028400-T1
LLU|FUN_028401-T1
LLU|FUN_028402-T1
LLU|FUN_028403-T1
LLU|FUN_028404-T1
LLU|FUN_028405-T1
LLU|FUN_028406-T1
LLU|FUN_028407-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_028408-T1
LLU|FUN_028409-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_028410-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_028411-T1
LLU|FUN_028412-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_028413-T1
LLU|FUN_028414-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_028415-T1
LLU|FUN_028416-T1
LLU|FUN_028417-T1
LLU|FUN_028418-T1
LLU|FUN_028419-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_028420-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_028421-T1
LLU|FUN_028422-T1
LLU|FUN_028423-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_028424-T1CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1
LLU|FUN_028425-T1
LLU|FUN_028426-T1TRNA METHYLTRANSFERASE
LLU|FUN_028427-T1
LLU|FUN_028428-T1IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL
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