About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_029389-T1TRANSLOCON-ASSOCIATED PROTEIN, DELTA SUBUNIT
LLU|FUN_029390-T1PHD-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_029391-T1
LLU|FUN_029392-T1REVERSE TRANSCRIPTASES
LLU|FUN_029393-T1JANUS-A/JANUS-B
LLU|FUN_029394-T1SOLUTE CARRIER FAMILY 35
LLU|FUN_029395-T1
LLU|FUN_029396-T1COLLAGEN ALPHA
LLU|FUN_029397-T1TOLL-LIKE RECEPTOR
LLU|FUN_029398-T1TOLL-LIKE RECEPTOR
LLU|FUN_029399-T1RIBOSOMAL PROTEIN L13
LLU|FUN_029400-T1
LLU|FUN_029401-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_029402-T1-
LLU|FUN_029403-T1
LLU|FUN_029404-T1ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
LLU|FUN_029405-T1S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED
LLU|FUN_029406-T1
LLU|FUN_029407-T1
LLU|FUN_029408-T1ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
LLU|FUN_029409-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
LLU|FUN_029410-T1PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17
LLU|FUN_029411-T1
LLU|FUN_029412-T1
LLU|FUN_029413-T1
LLU|FUN_029414-T1ANKYRIN REPEAT PROTEIN
LLU|FUN_029415-T1XAA-PRO AMINOPEPTIDASE 1
LLU|FUN_029416-T13'-5' EXONUCLEASE ERI1-RELATED
LLU|FUN_029417-T1SI:CH211-262H13.3-RELATED-RELATED
LLU|FUN_029418-T1PATCHED-RELATED
LLU|FUN_029419-T1PATCHED-RELATED
LLU|FUN_029420-T1
LLU|FUN_029421-T1
LLU|FUN_029422-T1D-ERYTHRULOSE REDUCTASE
LLU|FUN_029423-T1D-ERYTHRULOSE REDUCTASE
LLU|FUN_029424-T1
LLU|FUN_029425-T1D-ERYTHRULOSE REDUCTASE
LLU|FUN_029426-T1
LLU|FUN_029427-T1CRUMBS FAMILY MEMBER
LLU|FUN_029428-T1TRANSCRIPTIONAL ADAPTER 3-RELATED
LLU|FUN_029429-T1
LLU|FUN_029430-T1
LLU|FUN_029431-T1D-ERYTHRULOSE REDUCTASE
LLU|FUN_029432-T1
LLU|FUN_029433-T1D-ERYTHRULOSE REDUCTASE
LLU|FUN_029434-T1D-ERYTHRULOSE REDUCTASE
LLU|FUN_029435-T1POTE ANKYRIN DOMAIN
LLU|FUN_029436-T1
LLU|FUN_029437-T1
LLU|FUN_029438-T1
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