About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama710_5db7b01a
Ama711_5db7b01aG-PROTEIN COUPLED RECEPTOR
Ama713_5db7b01aCALMODULIN-LYSINE N-METHYLTRANSFERASE
Ama715_5db7b01aTOLL-LIKE RECEPTOR
Ama716_5db7b01aAGAP005574-PA
Ama718_5db7b01a
Ama719_5db7b01aPACHYTENE CHECKPOINT PROTEIN 2
Ama71_5db7b01aTBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Ama721_5db7b01a
Ama724_5db7b01a
Ama726_5db7b01aN-MYC DOWNSTREAM REGULATED
Ama727_5db7b01aATPASES OF THE PP SUPERFAMILY-RELATED
Ama728_5db7b01aREPLICATION PROTEIN A-RELATED
Ama729_5db7b01a
Ama731_5db7b01aTHUMP DOMAIN CONTAINING PROTEIN 1-RELATED
Ama732_5db7b01aNF-KAPPA-B INHIBITOR-INTERACTING RAS-LIKE PROTEIN
Ama733_5db7b01aDNA POLYMERASE
Ama734_5db7b01aMITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE
Ama735_5db7b01aCEREBELLIN-RELATED
Ama737_5db7b01aTHIOREDOXIN
Ama738_5db7b01a
Ama739_5db7b01aSLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Ama73_5db7b01aENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Ama740_5db7b01aZINC FINGER PROTEIN
Ama743_5db7b01aRNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
Ama744_5db7b01a
Ama745_5db7b01aINOSITOL POLYPHOSPHATE KINASE
Ama746_5db7b01aN-ALPHA-ACETYLTRANSFERASE 40
Ama747_5db7b01a
Ama749_5db7b01aSAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN
Ama74_5db7b01aTUMOR NECROSIS FACTOR FAMILY MEMBER
Ama750_5db7b01a
Ama751_5db7b01aEGF-LIKE DOMAIN-CONTAINING PROTEIN
Ama753_5db7b01aPHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
Ama754_5db7b01aRAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama755_5db7b01a30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER
Ama756_5db7b01a39S RIBOSOMAL PROTEIN L55, MITOCHONDRIAL
Ama757_5db7b01aCELL FATE DETERMINING PROTEIN MAB21-RELATED
Ama75_5db7b01aTUMOR NECROSIS FACTOR FAMILY MEMBER
Ama762_5db7b01aMANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE
Ama763_5db7b01a
Ama764_5db7b01aUNCHARACTERIZED
Ama765_5db7b01aCYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
Ama767_5db7b01aPROTEIN CBG23764
Ama76_5db7b01a
Ama771_5db7b01aREVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama772_5db7b01aWD40 REPEAT DOMAIN 95
Ama775_5db7b01aKUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Ama776_5db7b01aDNA-DIRECTED RNA POLYMERASE II, III
Ama777_5db7b01aLD02310P
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