About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_002683-T1
LLU|FUN_002684-T1
LLU|FUN_002685-T1
LLU|FUN_002686-T1MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED
LLU|FUN_002687-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_002688-T1FORKHEAD BOX PROTEIN J2 FAMILY MEMBER
LLU|FUN_002689-T1TRANSMEMBRANE GTPASE FZO1
LLU|FUN_002690-T1CORTISTATIN
LLU|FUN_002691-T1
LLU|FUN_002692-T1MIP08469P
LLU|FUN_002693-T1MIP08469P
LLU|FUN_002694-T1ATROPHIN-RELATED
LLU|FUN_002695-T1NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3
LLU|FUN_002696-T1UNCHARACTERIZED
LLU|FUN_002697-T1RAB GDP/GTP EXCHANGE FACTOR
LLU|FUN_002698-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_002699-T1FORKHEAD BOX PROTEIN
LLU|FUN_002700-T1
LLU|FUN_002701-T1CYSTEINE DESULFURYLASE FAMILY MEMBER
LLU|FUN_002702-T1
LLU|FUN_002703-T1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
LLU|FUN_002704-T1
LLU|FUN_002705-T1
LLU|FUN_002706-T1
LLU|FUN_002707-T1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
LLU|FUN_002708-T1CALBINDIN
LLU|FUN_002709-T1
LLU|FUN_002710-T139S RIBOSOMAL PROTEIN L36, MITOCHONDRIAL
LLU|FUN_002711-T1PROTEIN PHOSPHATASE 2C
LLU|FUN_002712-T1
LLU|FUN_002713-T1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
LLU|FUN_002714-T1
LLU|FUN_002715-T1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
LLU|FUN_002716-T1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
LLU|FUN_002717-T1
LLU|FUN_002718-T1
LLU|FUN_002719-T1
LLU|FUN_002720-T1
LLU|FUN_002721-T1
LLU|FUN_002722-T1PRESEQUENCE PROTEASE
LLU|FUN_002723-T1NUCLEOLAR PROTEIN 9
LLU|FUN_002724-T1
LLU|FUN_002725-T1
LLU|FUN_002726-T1UNCHARACTERIZED
LLU|FUN_002727-T1
LLU|FUN_002728-T1
LLU|FUN_002729-T1MUCIN/PORIMIN
LLU|FUN_002730-T1INHIBITOR OF APOPTOSIS
LLU|FUN_002731-T1
LLU|FUN_002732-T1
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