About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_002632-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_002633-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_002634-T1
LLU|FUN_002635-T1
LLU|FUN_002636-T1CRUMBS FAMILY MEMBER
LLU|FUN_002637-T1NG5
LLU|FUN_002638-T1ANGIOTENSIN-CONVERTING ENZYME
LLU|FUN_002639-T1ANGIOTENSIN-CONVERTING ENZYME
LLU|FUN_002640-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_002641-T1
LLU|FUN_002642-T1LOC100145250 PROTEIN
LLU|FUN_002643-T1
LLU|FUN_002644-T1C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
LLU|FUN_002645-T1GM2 GANGLIOSIDE ACTIVATOR PROTEIN
LLU|FUN_002646-T1
LLU|FUN_002647-T1
LLU|FUN_002649-T1CADHERIN-87A
LLU|FUN_002650-T1
LLU|FUN_002651-T1CADHERIN-87A
LLU|FUN_002652-T1
LLU|FUN_002653-T1
LLU|FUN_002654-T1
LLU|FUN_002655-T1RAN BINDING PROTEIN 9-RELATED
LLU|FUN_002656-T1
LLU|FUN_002657-T1VACUOLAR PROTEIN SORTING 26 RELATED
LLU|FUN_002658-T1
LLU|FUN_002659-T1PUR-TRANSCRIPTIONAL ACTIVATOR
LLU|FUN_002660-T1
LLU|FUN_002661-T1
LLU|FUN_002662-T1
LLU|FUN_002663-T1DEDICATOR OF CYTOKINESIS DOCK
LLU|FUN_002664-T1
LLU|FUN_002665-T1DEDICATOR OF CYTOKINESIS DOCK
LLU|FUN_002666-T1
LLU|FUN_002667-T1
LLU|FUN_002668-T1
LLU|FUN_002669-T1ZINC FINGER PROTEIN
LLU|FUN_002670-T1
LLU|FUN_002671-T1
LLU|FUN_002672-T1
LLU|FUN_002673-T1
LLU|FUN_002674-T1
LLU|FUN_002675-T1
LLU|FUN_002676-T1
LLU|FUN_002677-T1
LLU|FUN_002678-T1HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY
LLU|FUN_002679-T1PEPTIDASE S8
LLU|FUN_002680-T1
LLU|FUN_002681-T1EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
LLU|FUN_002682-T1
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