About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_002783-T1
LLU|FUN_002784-T1
LLU|FUN_002785-T1
LLU|FUN_002786-T1
LLU|FUN_002787-T1GEO13361P1-RELATED
LLU|FUN_002788-T1TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
LLU|FUN_002789-T1FRIZZLED
LLU|FUN_002790-T1
LLU|FUN_002791-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_002792-T1
LLU|FUN_002793-T1
LLU|FUN_002794-T1
LLU|FUN_002795-T1MATRIX PROTEIN, PUTATIVE-RELATED
LLU|FUN_002796-T1MATRIX PROTEIN, PUTATIVE-RELATED
LLU|FUN_002797-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
LLU|FUN_002798-T1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
LLU|FUN_002799-T141-2 PROTEIN ANTIGEN-RELATED
LLU|FUN_002800-T1CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
LLU|FUN_002801-T1GLUTATHIONE PEROXIDASE
LLU|FUN_002802-T1HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER
LLU|FUN_002803-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002804-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002805-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002806-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_002807-T1
LLU|FUN_002808-T1
LLU|FUN_002809-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_002810-T1
LLU|FUN_002811-T1
LLU|FUN_002812-T1
LLU|FUN_002813-T1
LLU|FUN_002814-T1PATCHED-RELATED
LLU|FUN_002815-T1FUKUTIN RELATED PROTEIN
LLU|FUN_002816-T1COLLAGEN ALPHA
LLU|FUN_002817-T1
LLU|FUN_002818-T1COLLAGEN ALPHA
LLU|FUN_002819-T1
LLU|FUN_002820-T1
LLU|FUN_002821-T1LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN
LLU|FUN_002822-T1
LLU|FUN_002823-T1DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED
LLU|FUN_002824-T1CEH-10 HOMEODOMAIN-CONTAINING HOMOLOG
LLU|FUN_002825-T1
LLU|FUN_002826-T1IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
LLU|FUN_002827-T1IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
LLU|FUN_002828-T1
LLU|FUN_002829-T1ARPIN
LLU|FUN_002830-T1V-TYPE ATP SYNTHASE SUBUNIT D
LLU|FUN_002831-T1SORTING NEXIN FAMILY MEMBER
LLU|FUN_002832-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 175
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