About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_002429-T1
LLU|FUN_002430-T1
LLU|FUN_002431-T1
LLU|FUN_002432-T1
LLU|FUN_002433-T1
LLU|FUN_002434-T1
LLU|FUN_002435-T1SMAD
LLU|FUN_002436-T1SMAD
LLU|FUN_002437-T1PROTEIN ZWILCH HOMOLOG
LLU|FUN_002438-T1PROTEIN ZWILCH HOMOLOG
LLU|FUN_002439-T1
LLU|FUN_002440-T1STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1
LLU|FUN_002441-T1MYOTUBULARIN-RELATED
LLU|FUN_002442-T1SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN
LLU|FUN_002443-T1DNAJ HOMOLOG SUBFAMILY C MEMBER
LLU|FUN_002444-T1
LLU|FUN_002445-T1MITOGEN-ACTIVATED PROTEIN KINASE
LLU|FUN_002446-T1
LLU|FUN_002447-T1
LLU|FUN_002448-T1
LLU|FUN_002449-T1PROTEASE M14 CARBOXYPEPTIDASE
LLU|FUN_002450-T1METAXIN RELATED
LLU|FUN_002451-T1UNCHARACTERIZED
LLU|FUN_002452-T1AP-5 COMPLEX SUBUNIT SIGMA-1
LLU|FUN_002453-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_002454-T1
LLU|FUN_002455-T1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
LLU|FUN_002456-T1GUANYLYL CYCLASE
LLU|FUN_002457-T1BONUS, ISOFORM C-RELATED
LLU|FUN_002458-T1
LLU|FUN_002459-T1GUANYLYL CYCLASE
LLU|FUN_002460-T1
LLU|FUN_002461-T14.1 G PROTEIN
LLU|FUN_002462-T1
LLU|FUN_002463-T1TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_002464-T1REPETIN
LLU|FUN_002465-T1UNCHARACTERIZED
LLU|FUN_002466-T1
LLU|FUN_002467-T1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
LLU|FUN_002469-T1
LLU|FUN_002470-T1
LLU|FUN_002471-T1
LLU|FUN_002472-T1
LLU|FUN_002473-T1
LLU|FUN_002474-T1
LLU|FUN_002475-T1
LLU|FUN_002476-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 22
LLU|FUN_002477-T1
LLU|FUN_002478-T1
LLU|FUN_002479-T1
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