About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_002128-T1
LLU|FUN_002129-T1
LLU|FUN_002130-T1
LLU|FUN_002131-T1PLEXIN
LLU|FUN_002132-T1N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
LLU|FUN_002133-T1
LLU|FUN_002134-T1
LLU|FUN_002135-T1ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10
LLU|FUN_002136-T1HIGH MOBILITY GROUP B PROTEIN 4-RELATED
LLU|FUN_002137-T1
LLU|FUN_002138-T1
LLU|FUN_002139-T1
LLU|FUN_002140-T1RASSF
LLU|FUN_002141-T1TUMOR SUPPRESSOR CANDIDATE 2
LLU|FUN_002142-T1DALRD3 PROTEIN
LLU|FUN_002143-T1GRAM DOMAIN-CONTAINING PROTEIN 4
LLU|FUN_002144-T1
LLU|FUN_002145-T1
LLU|FUN_002146-T1
LLU|FUN_002147-T1
LLU|FUN_002148-T1
LLU|FUN_002149-T1
LLU|FUN_002150-T1GRAM DOMAIN-CONTAINING PROTEIN 4
LLU|FUN_002151-T1
LLU|FUN_002152-T1RAB FAMILY
LLU|FUN_002153-T1PROTEIN-LYSINE N-METHYLTRANSFERASE METTL10
LLU|FUN_002154-T1MOLTING PROTEIN MLT-4
LLU|FUN_002155-T1SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATED
LLU|FUN_002156-T1
LLU|FUN_002157-T1
LLU|FUN_002158-T1
LLU|FUN_002159-T1
LLU|FUN_002160-T1DYNEIN HEAVY CHAIN
LLU|FUN_002161-T1DYNEIN HEAVY CHAIN
LLU|FUN_002162-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_002163-T1
LLU|FUN_002164-T1
LLU|FUN_002165-T1SOLUTE CARRIER FAMILY 35 MEMBER B
LLU|FUN_002166-T1DEOXYRIBONUCLEASE TATDN2-RELATED
LLU|FUN_002167-T1
LLU|FUN_002168-T1DEOXYRIBONUCLEASE TATDN2-RELATED
LLU|FUN_002169-T1
LLU|FUN_002170-T1-
LLU|FUN_002171-T1
LLU|FUN_002172-T1CYTOCHROME P450 FAMILY 4
LLU|FUN_002173-T1GLYCOSYL HYDROLASE DIGH
LLU|FUN_002174-T1TUBULIN
LLU|FUN_002175-T1
LLU|FUN_002176-T1
LLU|FUN_002177-T1HEAT SHOCK PROTEIN 90 FAMILY MEMBER
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