About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001978-T1
LLU|FUN_001979-T1SLL0310 PROTEIN
LLU|FUN_001980-T1DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED
LLU|FUN_001981-T1
LLU|FUN_001982-T1
LLU|FUN_001983-T1
LLU|FUN_001984-T1
LLU|FUN_001985-T1
LLU|FUN_001986-T1PROTEIN KISH-A
LLU|FUN_001987-T1
LLU|FUN_001988-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
LLU|FUN_001989-T1TRANSMEMBRANE PROTEIN 249
LLU|FUN_001990-T1
LLU|FUN_001991-T1
LLU|FUN_001992-T1TESTIS-EXPRESSED PROTEIN 52
LLU|FUN_001993-T1
LLU|FUN_001994-T1
LLU|FUN_001995-T1
LLU|FUN_001996-T1LITHOSTATHINE
LLU|FUN_001997-T1
LLU|FUN_001998-T1
LLU|FUN_001999-T1LITHOSTATHINE
LLU|FUN_002000-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_002001-T1
LLU|FUN_002002-T1
LLU|FUN_002003-T1
LLU|FUN_002004-T1DC11 ACN9 HOMOLOG
LLU|FUN_002005-T1DYNEIN INTERMEDIATE CHAIN
LLU|FUN_002006-T1
LLU|FUN_002007-T1PERIAXIN/AHNAK
LLU|FUN_002008-T1LITHOSTATHINE
LLU|FUN_002009-T1WD REPEAT DOMAIN-CONTAINING FAMILY
LLU|FUN_002010-T1MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE
LLU|FUN_002011-T1LITHOSTATHINE
LLU|FUN_002012-T1RIBOSOMAL PROTEIN L13
LLU|FUN_002013-T1HSD9
LLU|FUN_002014-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_002015-T1
LLU|FUN_002016-T1
LLU|FUN_002017-T1
LLU|FUN_002018-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_002019-T1
LLU|FUN_002020-T1
LLU|FUN_002021-T1
LLU|FUN_002022-T1
LLU|FUN_002023-T1
LLU|FUN_002024-T1
LLU|FUN_002025-T1MASK PROTEIN
LLU|FUN_002026-T1DNA POLYMERASE TYPE-X FAMILY MEMBER
LLU|FUN_002027-T1DNA POLYMERASE TYPE-X FAMILY MEMBER
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