About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001677-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_001678-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_001679-T1HEPARAN SULFATE SULFOTRANSFERASE
LLU|FUN_001680-T1HEPARAN SULFATE SULFOTRANSFERASE
LLU|FUN_001681-T1
LLU|FUN_001682-T1
LLU|FUN_001683-T1
LLU|FUN_001684-T1
LLU|FUN_001685-T1
LLU|FUN_001686-T1
LLU|FUN_001687-T1
LLU|FUN_001688-T1PROTEIN PHOSPHATASE
LLU|FUN_001689-T1PECANEX
LLU|FUN_001690-T1SERINE-THREONINE PROTEIN KINASE
LLU|FUN_001691-T1SERINE-THREONINE PROTEIN KINASE
LLU|FUN_001692-T1DOUBLE ZINC RIBBON AND ANKYRIN REPEAT-CONTAINING PROTEIN 1
LLU|FUN_001693-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_001694-T1
LLU|FUN_001695-T1
LLU|FUN_001696-T1MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE
LLU|FUN_001697-T1
LLU|FUN_001698-T1PROTEIN LLP HOMOLOG
LLU|FUN_001699-T1ACTIN
LLU|FUN_001700-T1
LLU|FUN_001701-T1
LLU|FUN_001702-T1
LLU|FUN_001703-T1PROLINE OXIDASE
LLU|FUN_001704-T1
LLU|FUN_001705-T1
LLU|FUN_001706-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_001707-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_001708-T1
LLU|FUN_001709-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_001710-T1
LLU|FUN_001711-T1
LLU|FUN_001712-T1
LLU|FUN_001713-T1
LLU|FUN_001714-T1
LLU|FUN_001715-T1
LLU|FUN_001716-T1
LLU|FUN_001717-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_001718-T1
LLU|FUN_001719-T1
LLU|FUN_001720-T1
LLU|FUN_001721-T1
LLU|FUN_001722-T1
LLU|FUN_001723-T1
LLU|FUN_001724-T1
LLU|FUN_001725-T1CRUMBS FAMILY MEMBER
LLU|FUN_001726-T1
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