About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001623-T1
LLU|FUN_001624-T1
LLU|FUN_001625-T1UNCHARACTERIZED
LLU|FUN_001626-T1
LLU|FUN_001627-T1WHEY ACDIC PROTEIN WAP
LLU|FUN_001628-T1WHEY ACDIC PROTEIN WAP
LLU|FUN_001629-T1
LLU|FUN_001630-T1
LLU|FUN_001631-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_001632-T1TRANSMEMBRANE PROTEIN 192
LLU|FUN_001633-T1
LLU|FUN_001634-T1DUAL SPECIFICITY PROTEIN KINASE
LLU|FUN_001635-T1
LLU|FUN_001636-T1
LLU|FUN_001637-T1
LLU|FUN_001638-T1
LLU|FUN_001639-T1
LLU|FUN_001640-T1THISBE
LLU|FUN_001641-T1
LLU|FUN_001642-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_001643-T1
LLU|FUN_001644-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_001645-T1DEOXYHYPUSINE SYNTHASE
LLU|FUN_001646-T1
LLU|FUN_001647-T1ADP-RIBOSYLGLYCOHYDROLASE
LLU|FUN_001648-T1ADP-RIBOSYLGLYCOHYDROLASE
LLU|FUN_001649-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_001650-T1
LLU|FUN_001651-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_001652-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_001653-T1
LLU|FUN_001654-T1
LLU|FUN_001655-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_001656-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_001657-T1
LLU|FUN_001658-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_001659-T1
LLU|FUN_001660-T1
LLU|FUN_001661-T1
LLU|FUN_001662-T1CYTOKINE RECEPTOR
LLU|FUN_001667-T1LYSINE-SPECIFIC DEMETHYLASE
LLU|FUN_001668-T1
LLU|FUN_001669-T1CYTOCHROME B-245 LIGHT CHAIN
LLU|FUN_001670-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_001671-T1DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED
LLU|FUN_001672-T1CARBONIC ANHYDRASE
LLU|FUN_001673-T1CARBONIC ANHYDRASE
LLU|FUN_001674-T1
LLU|FUN_001675-T1CARBONIC ANHYDRASE
LLU|FUN_001676-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
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