About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001422-T1
LLU|FUN_001423-T1
LLU|FUN_001424-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
LLU|FUN_001425-T1
LLU|FUN_001426-T1CADHERIN-23
LLU|FUN_001427-T1DESMOGLEIN FAMILY MEMBER
LLU|FUN_001428-T1WD40 REPEAT PROTEIN
LLU|FUN_001429-T1
LLU|FUN_001430-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_001431-T1
LLU|FUN_001432-T1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
LLU|FUN_001433-T1
LLU|FUN_001434-T1
LLU|FUN_001435-T1
LLU|FUN_001436-T1
LLU|FUN_001437-T1
LLU|FUN_001438-T1
LLU|FUN_001439-T1
LLU|FUN_001440-T1
LLU|FUN_001441-T1
LLU|FUN_001442-T1
LLU|FUN_001443-T1THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
LLU|FUN_001444-T1THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
LLU|FUN_001445-T1
LLU|FUN_001446-T1
LLU|FUN_001447-T1WD40 REPEAT DOMAIN 95
LLU|FUN_001448-T1MULTIDRUG RESISTANCE PROTEIN
LLU|FUN_001449-T1
LLU|FUN_001450-T1
LLU|FUN_001451-T1
LLU|FUN_001452-T1
LLU|FUN_001453-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE
LLU|FUN_001454-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE
LLU|FUN_001455-T1UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49
LLU|FUN_001456-T1SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F
LLU|FUN_001457-T1NY-REN-58 ANTIGEN
LLU|FUN_001458-T1KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED
LLU|FUN_001459-T1
LLU|FUN_001460-T1
LLU|FUN_001461-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_001462-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_001463-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_001464-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_001465-T1
LLU|FUN_001466-T1EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
LLU|FUN_001467-T1
LLU|FUN_001468-T1
LLU|FUN_001469-T1
LLU|FUN_001470-T1LIN37 HOMOLOG
LLU|FUN_001471-T1RIB43A-RELATED
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