About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001108-T1
LLU|FUN_001109-T1
LLU|FUN_001110-T1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
LLU|FUN_001111-T1
LLU|FUN_001112-T1TRICHOHYALIN-RELATED
LLU|FUN_001113-T1
LLU|FUN_001114-T1
LLU|FUN_001115-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_001116-T1
LLU|FUN_001117-T1
LLU|FUN_001118-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_001119-T1CRUMBS FAMILY MEMBER
LLU|FUN_001120-T1
LLU|FUN_001121-T1
LLU|FUN_001122-T1-
LLU|FUN_001123-T1BTB POZ DOMAIN CONTAINING 12
LLU|FUN_001124-T1
LLU|FUN_001125-T1
LLU|FUN_001126-T1FUKUTIN RELATED PROTEIN
LLU|FUN_001127-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_001128-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_001129-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_001130-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_001131-T1OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL
LLU|FUN_001132-T1PROTEIN, PUTATIVE-RELATED
LLU|FUN_001133-T1
LLU|FUN_001134-T1
LLU|FUN_001135-T1
LLU|FUN_001136-T1
LLU|FUN_001137-T1RYANODINE RECEPTOR AND IP3 RECEPTOR
LLU|FUN_001138-T1
LLU|FUN_001139-T1
LLU|FUN_001140-T1G PROTEIN PATHWAY SUPPRESSOR 2
LLU|FUN_001141-T1
LLU|FUN_001142-T1UNCHARACTERIZED
LLU|FUN_001143-T1UNCHARACTERIZED
LLU|FUN_001144-T1
LLU|FUN_001145-T1FORKHEAD BOX PROTEIN
LLU|FUN_001146-T1FORKHEAD BOX PROTEIN
LLU|FUN_001147-T1C-TYPE LECTIN SUPERFAMILY MEMBER
LLU|FUN_001148-T1
LLU|FUN_001149-T1
LLU|FUN_001150-T1
LLU|FUN_001151-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_001152-T1
LLU|FUN_001153-T1RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG
LLU|FUN_001154-T1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
LLU|FUN_001155-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_001156-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_001157-T1PA14 DOMAIN-CONTAINING PROTEIN
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