About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_000806-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_000807-T1
LLU|FUN_000808-T1
LLU|FUN_000809-T1CALCIUM BINDING PROTEIN
LLU|FUN_000810-T1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
LLU|FUN_000811-T1
LLU|FUN_000812-T1
LLU|FUN_000813-T1
LLU|FUN_000814-T1
LLU|FUN_000815-T1
LLU|FUN_000816-T1
LLU|FUN_000817-T1
LLU|FUN_000818-T1
LLU|FUN_000819-T1BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
LLU|FUN_000820-T1WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 1
LLU|FUN_000821-T1
LLU|FUN_000822-T1
LLU|FUN_000823-T1
LLU|FUN_000824-T1
LLU|FUN_000825-T1
LLU|FUN_000826-T1
LLU|FUN_000827-T1
LLU|FUN_000829-T1
LLU|FUN_000830-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_000831-T1
LLU|FUN_000832-T1
LLU|FUN_000833-T1THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
LLU|FUN_000834-T1THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
LLU|FUN_000835-T1
LLU|FUN_000836-T1
LLU|FUN_000837-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_000838-T1
LLU|FUN_000839-T1
LLU|FUN_000840-T1
LLU|FUN_000841-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
LLU|FUN_000842-T1PHOSPHATIDYLINOSITOL KINASE
LLU|FUN_000843-T1SYNAPTIC ADHESION-LIKE MOLECULE SALM
LLU|FUN_000844-T1CALSYNTENIN
LLU|FUN_000845-T1
LLU|FUN_000846-T1
LLU|FUN_000847-T1
LLU|FUN_000848-T1OTU DOMAIN CONTAINING PROTEIN
LLU|FUN_000849-T1SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER
LLU|FUN_000850-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_000851-T1
LLU|FUN_000852-T1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
LLU|FUN_000853-T1
LLU|FUN_000854-T1GUANYLYL CYCLASE
LLU|FUN_000855-T1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
LLU|FUN_000856-T1GUANYLYL CYCLASE
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