About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_000504-T1
LLU|FUN_000505-T1
LLU|FUN_000506-T1
LLU|FUN_000507-T1
LLU|FUN_000508-T1COLLAGEN ALPHA
LLU|FUN_000509-T1
LLU|FUN_000510-T1
LLU|FUN_000511-T1SH3-BINDING
LLU|FUN_000512-T1SH3-BINDING
LLU|FUN_000513-T1
LLU|FUN_000514-T1SERINE/THREONINE-PROTEIN KINASE IAL-RELATED
LLU|FUN_000515-T1PALMITOYLTRANSFERASE ZDHHC16
LLU|FUN_000516-T1
LLU|FUN_000517-T1INTERFERON-INDUCED PROTEIN 35/NMI N-MYC/STAT INTERACTING PROTEIN
LLU|FUN_000518-T1
LLU|FUN_000519-T1NEPHRIN
LLU|FUN_000520-T1NEPHRIN
LLU|FUN_000521-T1
LLU|FUN_000522-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_000523-T1NEPHRIN
LLU|FUN_000524-T1
LLU|FUN_000525-T1
LLU|FUN_000526-T1
LLU|FUN_000527-T1
LLU|FUN_000528-T1
LLU|FUN_000529-T1
LLU|FUN_000530-T1
LLU|FUN_000531-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_000532-T1
LLU|FUN_000533-T1
LLU|FUN_000534-T1
LLU|FUN_000535-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
LLU|FUN_000536-T1N6-ADENOSINE-METHYLTRANSFERASE
LLU|FUN_000537-T1MATRIN 3/NUCLEAR PROTEIN 220-RELATED
LLU|FUN_000538-T1
LLU|FUN_000539-T1CYTOCHROME C1 HEME LYASE
LLU|FUN_000540-T1
LLU|FUN_000541-T1CYTOCHROME C1 HEME LYASE
LLU|FUN_000542-T1F-BOX/TPR REPEAT PROTEIN POF3
LLU|FUN_000543-T1ZINC FINGER, ZZ TYPE
LLU|FUN_000544-T1PHOSPHATIDYLINOSITOL GLYCAN-RELATED
LLU|FUN_000545-T1PHOSPHATIDYLINOSITOL GLYCAN-RELATED
LLU|FUN_000546-T1
LLU|FUN_000547-T1
LLU|FUN_000548-T1GLUTAMINE SYNTHETASE
LLU|FUN_000549-T1
LLU|FUN_000550-T1GLUTAMINE SYNTHETASE
LLU|FUN_000551-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_000552-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_000553-T1G-PROTEIN COUPLED RECEPTOR
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