About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_000202-T1NEURALIZED
LLU|FUN_000203-T1NEURALIZED
LLU|FUN_000204-T1
LLU|FUN_000206-T1
LLU|FUN_000207-T1
LLU|FUN_000208-T1
LLU|FUN_000209-T1NEURALIZED
LLU|FUN_000210-T1NEURALIZED
LLU|FUN_000211-T1SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
LLU|FUN_000212-T1SPLICING FACTOR 3B SUBUNIT 4
LLU|FUN_000213-T1RAP GTPASE-ACTIVATING PROTEIN
LLU|FUN_000214-T1RAP GTPASE-ACTIVATING PROTEIN
LLU|FUN_000215-T1
LLU|FUN_000216-T1
LLU|FUN_000217-T1
LLU|FUN_000218-T1
LLU|FUN_000219-T1
LLU|FUN_000220-T1MYELOID LEUKEMIA FACTOR
LLU|FUN_000221-T1ASPARTATE AMINOTRANSFERASE
LLU|FUN_000222-T1
LLU|FUN_000223-T1
LLU|FUN_000224-T1
LLU|FUN_000225-T1GH28348P
LLU|FUN_000226-T1
LLU|FUN_000227-T1
LLU|FUN_000228-T1
LLU|FUN_000229-T1
LLU|FUN_000230-T1GH28348P
LLU|FUN_000231-T1
LLU|FUN_000232-T1KELCH DOMAIN-CONTAINING PROTEIN
LLU|FUN_000233-T1
LLU|FUN_000234-T1ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN
LLU|FUN_000235-T1RNA-BINDING PROTEIN NOB1
LLU|FUN_000236-T1
LLU|FUN_000237-T1
LLU|FUN_000238-T1
LLU|FUN_000239-T1
LLU|FUN_000240-T1
LLU|FUN_000241-T1
LLU|FUN_000242-T1
LLU|FUN_000243-T1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
LLU|FUN_000244-T1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
LLU|FUN_000245-T1
LLU|FUN_000246-T1
LLU|FUN_000247-T1
LLU|FUN_000248-T1
LLU|FUN_000249-T1
LLU|FUN_000250-T1T-BOX PROTEIN-RELATED
LLU|FUN_000251-T1T-BOX PROTEIN-RELATED
LLU|FUN_000252-T1
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