About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_000304-T1
LLU|FUN_000305-T1
LLU|FUN_000306-T1
LLU|FUN_000307-T1
LLU|FUN_000308-T1ZINC FINGER AND BTB DOMAIN-CONTAINING
LLU|FUN_000309-T1
LLU|FUN_000310-T1LD33804P
LLU|FUN_000311-T1
LLU|FUN_000312-T1
LLU|FUN_000313-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_000314-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_000315-T1
LLU|FUN_000316-T1
LLU|FUN_000317-T1
LLU|FUN_000318-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_000319-T1PHOSPHORYLATED CTD INTERACTING FACTOR 1
LLU|FUN_000320-T1AQUAPORIN TRANSPORTER
LLU|FUN_000321-T1NUCLEAR HORMONE RECEPTOR
LLU|FUN_000322-T1CDC68 RELATED
LLU|FUN_000323-T1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2
LLU|FUN_000324-T1DNA TOPOISOMERASE I
LLU|FUN_000325-T1
LLU|FUN_000326-T1
LLU|FUN_000327-T1
LLU|FUN_000328-T1
LLU|FUN_000329-T1
LLU|FUN_000330-T1
LLU|FUN_000331-T1
LLU|FUN_000332-T1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_000333-T1NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED
LLU|FUN_000334-T1
LLU|FUN_000335-T1LYSOPHOSPHOLIPASE-RELATED
LLU|FUN_000336-T1STRIATED MUSCLE ACTIVATOR OF RHO-DEPENDENT SIGNALING-RELATED
LLU|FUN_000337-T1MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25
LLU|FUN_000338-T1MITOCHONDRIAL RIBOSOMAL PROTEIN S5
LLU|FUN_000339-T1UNCHARACTERIZED
LLU|FUN_000340-T1
LLU|FUN_000341-T1
LLU|FUN_000342-T1
LLU|FUN_000343-T1HEMOGLOBINASE FAMILY MEMBER
LLU|FUN_000344-T1
LLU|FUN_000345-T1MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED
LLU|FUN_000346-T1MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED
LLU|FUN_000347-T1FIBROIN HEAVY CHAIN FIB-H LIKE PROTEIN
LLU|FUN_000348-T1
LLU|FUN_000349-T1MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED
LLU|FUN_000350-T1UNCHARACTERIZED
LLU|FUN_000351-T1
LLU|FUN_000352-T1
LLU|FUN_000353-T1
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