About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_000454-T1TETRASPANIN
LLU|FUN_000455-T1TETRASPANIN
LLU|FUN_000456-T1GEO09659P1
LLU|FUN_000457-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_000458-T1CYTOCHROME B-245 CHAPERONE 1
LLU|FUN_000459-T1REGULATORY-ASSOCIATED PROTEIN OF MTOR
LLU|FUN_000460-T1SUPPRESSOR OF FUSED
LLU|FUN_000461-T1RIBOSOMAL RNA METHYLTRANSFERASE
LLU|FUN_000462-T1FLAVIN REDUCTASE
LLU|FUN_000463-T130S 40S RIBOSOMAL PROTEIN
LLU|FUN_000464-T1CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
LLU|FUN_000465-T1
LLU|FUN_000466-T1
LLU|FUN_000467-T1
LLU|FUN_000468-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_000469-T1
LLU|FUN_000470-T1
LLU|FUN_000471-T1
LLU|FUN_000472-T1
LLU|FUN_000473-T1
LLU|FUN_000474-T1RE45066P-RELATED
LLU|FUN_000475-T1
LLU|FUN_000476-T1
LLU|FUN_000477-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_000478-T1
LLU|FUN_000479-T1
LLU|FUN_000480-T1
LLU|FUN_000481-T1
LLU|FUN_000482-T1
LLU|FUN_000483-T1NETRIN/LAMININ-RELATED
LLU|FUN_000484-T1OS10G0105400 PROTEIN
LLU|FUN_000485-T1
LLU|FUN_000486-T1
LLU|FUN_000487-T1OS10G0105400 PROTEIN
LLU|FUN_000488-T1STANNIOCALCIN
LLU|FUN_000489-T1PROPERDIN
LLU|FUN_000490-T1OS10G0105400 PROTEIN
LLU|FUN_000491-T1
LLU|FUN_000492-T1DUF614 FAMILY PROTEIN-RELATED
LLU|FUN_000493-T1
LLU|FUN_000494-T1
LLU|FUN_000495-T1PEROXISOMAL BIOGENESIS FACTOR 3
LLU|FUN_000496-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_000497-T1METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
LLU|FUN_000498-T1DYNEIN INTERMEDIATE CHAIN
LLU|FUN_000499-T1THIOREDOXIN PEROXIDASE
LLU|FUN_000500-T1
LLU|FUN_000501-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_000502-T1
LLU|FUN_000503-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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