About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_000655-T1
LLU|FUN_000656-T1ALPHA CATENIN
LLU|FUN_000657-T1ANKYRIN REPEAT PROTEIN
LLU|FUN_000658-T1
LLU|FUN_000659-T1
LLU|FUN_000660-T1
LLU|FUN_000661-T1DOCKING PROTEIN RELATED
LLU|FUN_000662-T1
LLU|FUN_000663-T1DOCKING PROTEIN RELATED
LLU|FUN_000664-T1DOCKING PROTEIN RELATED
LLU|FUN_000665-T1DOCKING PROTEIN RELATED
LLU|FUN_000666-T1
LLU|FUN_000667-T1DOCKING PROTEIN RELATED
LLU|FUN_000668-T1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
LLU|FUN_000669-T1
LLU|FUN_000670-T1ATP-DEPENDENT RNA HELICASE DBP3
LLU|FUN_000671-T1
LLU|FUN_000672-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 172
LLU|FUN_000673-T1SUBGROUP IIII AMINOTRANSFERASE
LLU|FUN_000674-T1SUBGROUP IIII AMINOTRANSFERASE
LLU|FUN_000675-T1SET DOMAIN PROTEINS
LLU|FUN_000676-T1RYANODINE RECEPTOR AND IP3 RECEPTOR
LLU|FUN_000677-T1PEPTIDASE
LLU|FUN_000678-T1
LLU|FUN_000679-T1
LLU|FUN_000680-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_000681-T1
LLU|FUN_000682-T1PATCHED-RELATED
LLU|FUN_000683-T1
LLU|FUN_000684-T1
LLU|FUN_000685-T1ACROSIN-RELATED
LLU|FUN_000686-T1
LLU|FUN_000687-T1
LLU|FUN_000688-T1
LLU|FUN_000689-T1OVOCHYMASE-RELATED
LLU|FUN_000690-T1ACROSIN-RELATED
LLU|FUN_000691-T1NEUROPEPTIDE S RECEPTOR
LLU|FUN_000692-T1CARDIOACCELERATORY PEPTIDE RECEPTOR-RELATED
LLU|FUN_000693-T1NEUROPEPTIDE S RECEPTOR
LLU|FUN_000694-T1
LLU|FUN_000695-T1
LLU|FUN_000696-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_000697-T1
LLU|FUN_000698-T1
LLU|FUN_000699-T1PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
LLU|FUN_000700-T1
LLU|FUN_000701-T1
LLU|FUN_000702-T1
LLU|FUN_000703-T1
LLU|FUN_000704-T1
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