About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_000756-T1POLYCYSTIN-1
LLU|FUN_000757-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_000758-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_000759-T1
LLU|FUN_000760-T1BETA1,3-GALACTOSYLTRANSFERASE
LLU|FUN_000761-T1
LLU|FUN_000762-T1BETA1,3-GALACTOSYLTRANSFERASE
LLU|FUN_000763-T1
LLU|FUN_000764-T1
LLU|FUN_000765-T1BETA1,3-GALACTOSYLTRANSFERASE
LLU|FUN_000766-T1BETA1,3-GALACTOSYLTRANSFERASE
LLU|FUN_000767-T1
LLU|FUN_000768-T1PROTEIN CBG24663
LLU|FUN_000769-T1
LLU|FUN_000770-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_000771-T1
LLU|FUN_000772-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_000773-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_000774-T1
LLU|FUN_000775-T1
LLU|FUN_000776-T1
LLU|FUN_000777-T1
LLU|FUN_000778-T1
LLU|FUN_000779-T1MRNA-CAPPING ENZYME
LLU|FUN_000780-T1
LLU|FUN_000781-T1
LLU|FUN_000782-T1
LLU|FUN_000783-T1NUCLEOPORIN NUP84-RELATED
LLU|FUN_000784-T1CCAAT DISPLACEMENT PROTEIN-RELATED
LLU|FUN_000785-T1
LLU|FUN_000786-T1CCAAT DISPLACEMENT PROTEIN-RELATED
LLU|FUN_000787-T1PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65
LLU|FUN_000788-T1
LLU|FUN_000789-T1
LLU|FUN_000790-T1
LLU|FUN_000791-T1
LLU|FUN_000792-T1
LLU|FUN_000793-T1
LLU|FUN_000794-T1SPORULATION-SPECIFIC PROTEIN-RELATED
LLU|FUN_000795-T1
LLU|FUN_000796-T1
LLU|FUN_000797-T1
LLU|FUN_000798-T1
LLU|FUN_000799-T1
LLU|FUN_000800-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 77
LLU|FUN_000801-T1NUCLEOTIDE KINASE
LLU|FUN_000802-T1TRANSCRIPTION TERMINATION FACTOR 1
LLU|FUN_000803-T1TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
LLU|FUN_000804-T1HOMEO BOX HB9 LIKE A-RELATED
LLU|FUN_000805-T1BETA-HEXOSAMINIDASE
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