About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_000907-T1
LLU|FUN_000908-T1
LLU|FUN_000909-T1DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
LLU|FUN_000910-T1
LLU|FUN_000911-T1
LLU|FUN_000912-T1
LLU|FUN_000913-T1
LLU|FUN_000914-T1
LLU|FUN_000915-T1GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL
LLU|FUN_000916-T1FIVE-SPAN TRANSMEMBRANE PROTEIN M83
LLU|FUN_000917-T1
LLU|FUN_000918-T1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_000919-T1
LLU|FUN_000920-T1SR-RELATED CTD ASSOCIATED FACTOR 6
LLU|FUN_000921-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_000922-T1PHOSPHOHEXOMUTASE FAMILY MEMBER
LLU|FUN_000923-T1
LLU|FUN_000924-T1PHOSPHOHEXOMUTASE FAMILY MEMBER
LLU|FUN_000925-T1
LLU|FUN_000926-T1
LLU|FUN_000927-T1
LLU|FUN_000928-T1
LLU|FUN_000929-T1
LLU|FUN_000930-T1
LLU|FUN_000931-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_000932-T1
LLU|FUN_000933-T1PROTEIN ZERKNUELLT 1-RELATED
LLU|FUN_000934-T1
LLU|FUN_000935-T1GS HOMEOBOX 2
LLU|FUN_000936-T1
LLU|FUN_000937-T1SULFATE TRANSPORTER
LLU|FUN_000938-T1SULFATE TRANSPORTER
LLU|FUN_000939-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 16
LLU|FUN_000940-T1
LLU|FUN_000941-T1
LLU|FUN_000942-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_000943-T1
LLU|FUN_000944-T1
LLU|FUN_000945-T1DED DOMAIN-CONTAINING PROTEIN
LLU|FUN_000946-T1
LLU|FUN_000947-T1RE45066P-RELATED
LLU|FUN_000948-T1RING FINGER PROTEIN 25
LLU|FUN_000949-T1DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 1
LLU|FUN_000950-T1
LLU|FUN_000951-T1OPTICIN
LLU|FUN_000952-T1
LLU|FUN_000953-T1
LLU|FUN_000954-T1
LLU|FUN_000955-T1
LLU|FUN_000956-T1
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