About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001058-T1
LLU|FUN_001059-T1MALEYLACETOACETATE ISOMERASE
LLU|FUN_001060-T1
LLU|FUN_001061-T1
LLU|FUN_001062-T1SPLICING FACTOR 3B
LLU|FUN_001063-T1SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR
LLU|FUN_001064-T1BAND 7 PROTEIN-RELATED
LLU|FUN_001065-T1
LLU|FUN_001066-T1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
LLU|FUN_001067-T1
LLU|FUN_001068-T1ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
LLU|FUN_001069-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_001070-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_001071-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_001072-T1
LLU|FUN_001073-T1
LLU|FUN_001074-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_001075-T1WD REPEAT DOMAIN-CONTAINING FAMILY
LLU|FUN_001076-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
LLU|FUN_001077-T1
LLU|FUN_001078-T1TGF-BETA FAMILY
LLU|FUN_001079-T1
LLU|FUN_001080-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_001081-T1
LLU|FUN_001082-T1
LLU|FUN_001083-T1
LLU|FUN_001084-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_001085-T1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
LLU|FUN_001086-T1
LLU|FUN_001087-T1RGD1565685 PROTEIN
LLU|FUN_001088-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
LLU|FUN_001089-T1
LLU|FUN_001090-T1
LLU|FUN_001091-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_001092-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
LLU|FUN_001093-T1
LLU|FUN_001094-T1
LLU|FUN_001095-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
LLU|FUN_001096-T1
LLU|FUN_001097-T1
LLU|FUN_001098-T1
LLU|FUN_001099-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_001100-T1AMINO ACID TRANSPORTER
LLU|FUN_001101-T1LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2
LLU|FUN_001102-T1
LLU|FUN_001103-T1
LLU|FUN_001104-T1DYNAMIN
LLU|FUN_001105-T1
LLU|FUN_001106-T1
LLU|FUN_001107-T1DYNAMIN
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