About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001008-T1
LLU|FUN_001009-T1
LLU|FUN_001010-T1
LLU|FUN_001011-T1
LLU|FUN_001012-T1NEDD4 FAMILY INTERACTING PROTEIN 1/2
LLU|FUN_001013-T1AGAP001705-PA
LLU|FUN_001014-T1
LLU|FUN_001015-T1
LLU|FUN_001016-T1FATTY ACID SYNTHASE
LLU|FUN_001017-T1
LLU|FUN_001018-T1ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 1
LLU|FUN_001019-T1HISTONE ACETYLTRANSFERASE COMPLEX
LLU|FUN_001020-T1
LLU|FUN_001021-T1
LLU|FUN_001022-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_001023-T1
LLU|FUN_001024-T1
LLU|FUN_001025-T1HISTONE ACETYLTRANSFERASE COMPLEX
LLU|FUN_001026-T1ZINC/IRON TRANSPORTER
LLU|FUN_001027-T1UNCHARACTERIZED
LLU|FUN_001028-T1LONGEVITY ASSURANCE FACTOR 1 LAG1
LLU|FUN_001029-T1
LLU|FUN_001030-T1
LLU|FUN_001031-T1
LLU|FUN_001032-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
LLU|FUN_001033-T1DENTIN SIALOPHOSPHOPROTEIN
LLU|FUN_001034-T1
LLU|FUN_001035-T1
LLU|FUN_001036-T1
LLU|FUN_001037-T1FRIZZLED
LLU|FUN_001038-T1
LLU|FUN_001039-T1ZGC:195170
LLU|FUN_001040-T1PUTATIVE-RELATED
LLU|FUN_001041-T1
LLU|FUN_001042-T1UNCHARACTERIZED
LLU|FUN_001043-T1UNCHARACTERIZED
LLU|FUN_001044-T1POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
LLU|FUN_001045-T1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
LLU|FUN_001046-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 17
LLU|FUN_001047-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_001048-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_001049-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_001050-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_001051-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_001052-T1
LLU|FUN_001053-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_001054-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_001055-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_001056-T1DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
LLU|FUN_001057-T1FMRFAMIDE RECEPTOR-RELATED
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