About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001208-T1
LLU|FUN_001209-T1
LLU|FUN_001210-T1
LLU|FUN_001211-T1-
LLU|FUN_001212-T1
LLU|FUN_001213-T1
LLU|FUN_001214-T1
LLU|FUN_001215-T1
LLU|FUN_001216-T1
LLU|FUN_001217-T1
LLU|FUN_001218-T1
LLU|FUN_001219-T1NUCLEOSIDE DIPHOSPHATE KINASE
LLU|FUN_001220-T1DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED
LLU|FUN_001221-T1
LLU|FUN_001222-T1
LLU|FUN_001223-T1DEOXYNUCLEOSIDE KINASE
LLU|FUN_001224-T1RIBOSOMAL PROTEIN S7
LLU|FUN_001225-T1MOLTING PROTEIN MLT-4
LLU|FUN_001226-T1
LLU|FUN_001227-T1
LLU|FUN_001228-T1RUN AND FYVE DOMAIN-CONTAINING PROTEIN 2-LIKE PROTEIN
LLU|FUN_001229-T1BETA TRANSDUCIN-RELATED PROTEIN
LLU|FUN_001230-T1
LLU|FUN_001231-T1
LLU|FUN_001232-T1BETA TRANSDUCIN-RELATED PROTEIN
LLU|FUN_001233-T1NACHT DOMAIN- AND WD REPEAT-CONTAINING PROTEIN 1
LLU|FUN_001234-T1RIBONUCLEOPROTEIN RB97D
LLU|FUN_001235-T1
LLU|FUN_001236-T1IMMUNOGLOBULIN
LLU|FUN_001237-T1TRANSFORMING GROWTH FACTOR ALPHA
LLU|FUN_001238-T1P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN
LLU|FUN_001239-T1HOMEOBOX PROTEIN ARISTALESS
LLU|FUN_001240-T1CARNITINE O-ACYLTRANSFERASE
LLU|FUN_001241-T1
LLU|FUN_001242-T1
LLU|FUN_001243-T1
LLU|FUN_001244-T1
LLU|FUN_001245-T1-
LLU|FUN_001246-T1
LLU|FUN_001247-T1
LLU|FUN_001248-T1
LLU|FUN_001249-T1
LLU|FUN_001250-T1
LLU|FUN_001251-T1
LLU|FUN_001252-T1DESMOGLEIN FAMILY MEMBER
LLU|FUN_001253-T1
LLU|FUN_001254-T1METHIONINE AMINOPEPTIDASE
LLU|FUN_001255-T1ALCOHOL DEHYDROGENASE
LLU|FUN_001256-T1ALCOHOL DEHYDROGENASE
LLU|FUN_001257-T1ACTIVATING TRANSCRIPTION FACTOR ATF 4/5
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