About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001258-T1UNCHARACTERIZED
LLU|FUN_001259-T1NUCLEAR MOVEMENT PROTEIN NUDC
LLU|FUN_001260-T1ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
LLU|FUN_001261-T1MYOINOSITOL OXYGENASE
LLU|FUN_001262-T1UNCHARACTERIZED
LLU|FUN_001263-T1
LLU|FUN_001264-T1
LLU|FUN_001265-T1
LLU|FUN_001266-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE DDB_G0269404-RELATED
LLU|FUN_001267-T1CENTROSOMAL PROTEIN OF 76 KDA
LLU|FUN_001268-T1NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
LLU|FUN_001269-T1ZINC FINGER PROTEIN ZIC AND GLI
LLU|FUN_001270-T1
LLU|FUN_001271-T1
LLU|FUN_001272-T1ADAPTIN, ALPHA/GAMMA/EPSILON
LLU|FUN_001273-T1PLEXIN
LLU|FUN_001274-T1
LLU|FUN_001275-T1
LLU|FUN_001276-T1
LLU|FUN_001277-T1PLEXIN
LLU|FUN_001278-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_001279-T1
LLU|FUN_001280-T1
LLU|FUN_001281-T1NUCLEAR PROTEIN MDM1
LLU|FUN_001282-T1VACUOLAR ATP SYNTHASE SUBUNIT S1
LLU|FUN_001283-T130S RIBOSOMAL PROTEIN S12 FAMILY MEMBER
LLU|FUN_001284-T1SULFATE TRANSPORTER
LLU|FUN_001285-T1
LLU|FUN_001286-T1TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN 4
LLU|FUN_001288-T1UNCHARACTERIZED
LLU|FUN_001289-T1
LLU|FUN_001290-T1
LLU|FUN_001291-T1CYCLIN DEPENDANT KINASE-5 ACTIVATOR
LLU|FUN_001292-T1MYOTROPHIN
LLU|FUN_001293-T1PYRIDOXINE-5-PHOSPHATE OXIDASE
LLU|FUN_001294-T1
LLU|FUN_001295-T1GLYCOSYLTRANSFERASE-LIKE 1
LLU|FUN_001296-T1
LLU|FUN_001297-T1
LLU|FUN_001298-T1
LLU|FUN_001299-T1
LLU|FUN_001300-T1
LLU|FUN_001301-T1
LLU|FUN_001302-T1
LLU|FUN_001303-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_001304-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_001305-T1
LLU|FUN_001306-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_001307-T1
LLU|FUN_001308-T1
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