About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001522-T1
LLU|FUN_001523-T1
LLU|FUN_001524-T1
LLU|FUN_001525-T1LAMIN DM0-RELATED
LLU|FUN_001526-T1RRNA METHYLTRANSFERASE 3,
LLU|FUN_001527-T1
LLU|FUN_001528-T1
LLU|FUN_001529-T1
LLU|FUN_001530-T1NETRIN RECEPTOR UNC5
LLU|FUN_001531-T1RETICULON-LIKE PROTEIN
LLU|FUN_001532-T1CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
LLU|FUN_001533-T1L-ASPARAGINASE
LLU|FUN_001534-T1L-ASPARAGINASE
LLU|FUN_001535-T1
LLU|FUN_001536-T1TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X
LLU|FUN_001537-T1UNCHARACTERIZED
LLU|FUN_001539-T1
LLU|FUN_001540-T1
LLU|FUN_001541-T1UFM1-SPECIFIC PROTEASE 2
LLU|FUN_001542-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_001543-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_001544-T1
LLU|FUN_001545-T1
LLU|FUN_001546-T1
LLU|FUN_001547-T1
LLU|FUN_001548-T1
LLU|FUN_001549-T1
LLU|FUN_001550-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_001551-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_001552-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_001553-T1
LLU|FUN_001554-T1PHD-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_001555-T1VALYL-TRNA SYNTHETASES
LLU|FUN_001556-T1
LLU|FUN_001557-T1
LLU|FUN_001558-T1
LLU|FUN_001559-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_001560-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_001561-T1MALE FERTILITY FACTOR KL5
LLU|FUN_001562-T1MALE FERTILITY FACTOR KL5
LLU|FUN_001563-T1DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
LLU|FUN_001564-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_001565-T1
LLU|FUN_001566-T1
LLU|FUN_001567-T1
LLU|FUN_001568-T1
LLU|FUN_001569-T1
LLU|FUN_001570-T1
LLU|FUN_001571-T1
LLU|FUN_001572-T1UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN
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