About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_001472-T1STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
LLU|FUN_001473-T1NF-KAPPA-B ESSENTIAL MODULATOR
LLU|FUN_001474-T1
LLU|FUN_001475-T1
LLU|FUN_001476-T1
LLU|FUN_001477-T1CALPAIN
LLU|FUN_001478-T1PROTEIN C20ORF43 HOMOLOG
LLU|FUN_001479-T1UNCHARACTERIZED
LLU|FUN_001480-T1LYSOPHOSPHOLIPASE-RELATED
LLU|FUN_001481-T1RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1
LLU|FUN_001482-T12-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA
LLU|FUN_001483-T1
LLU|FUN_001484-T1
LLU|FUN_001485-T1
LLU|FUN_001486-T1
LLU|FUN_001487-T1
LLU|FUN_001488-T1
LLU|FUN_001489-T1DUF853 DOMAIN-CONTAINING PROTEIN
LLU|FUN_001490-T1EXPORTED SERINE/THREONINE PROTEIN KINASE
LLU|FUN_001491-T1
LLU|FUN_001492-T1ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN
LLU|FUN_001493-T1S-ADENOSYL-METHYLTRANSFERASE MRAW
LLU|FUN_001494-T1
LLU|FUN_001495-T1
LLU|FUN_001496-T1LD39211P
LLU|FUN_001497-T1LEUCINE-RICH REPEAT-CONTAINING
LLU|FUN_001498-T1PEROXISOMAL BIOGENESIS FACTOR 19
LLU|FUN_001499-T1
LLU|FUN_001500-T1TRANSMEMBRANE PROTEIN 136
LLU|FUN_001501-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
LLU|FUN_001502-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
LLU|FUN_001503-T1
LLU|FUN_001504-T1MUTATED IN BLADDER CANCER 1
LLU|FUN_001505-T1XPA-BINDING PROTEIN 1-RELATED
LLU|FUN_001506-T1COMM DOMAIN CONTAINING PROTEIN 10
LLU|FUN_001507-T1
LLU|FUN_001508-T1
LLU|FUN_001509-T1
LLU|FUN_001510-T1
LLU|FUN_001511-T1PROTEIN FAM221A-RELATED
LLU|FUN_001512-T1
LLU|FUN_001513-T1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
LLU|FUN_001514-T1DENN DOMAIN-CONTAINING PROTEIN 4
LLU|FUN_001515-T1DENN DOMAIN-CONTAINING PROTEIN 4
LLU|FUN_001516-T1
LLU|FUN_001517-T1RIBOSOMAL PROTEIN S7
LLU|FUN_001518-T1UNCHARACTERIZED
LLU|FUN_001519-T1SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
LLU|FUN_001520-T1LAMIN DM0-RELATED
LLU|FUN_001521-T1
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