About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_002028-T1HISTONE ACETYLTRANSFERASE
LLU|FUN_002029-T1
LLU|FUN_002030-T1
LLU|FUN_002031-T1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
LLU|FUN_002032-T1
LLU|FUN_002033-T1
LLU|FUN_002034-T1
LLU|FUN_002035-T1
LLU|FUN_002036-T1MYOSIN LIGHT CHAIN 1, 3
LLU|FUN_002037-T1MYOSIN LIGHT CHAIN 1, 3
LLU|FUN_002038-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
LLU|FUN_002039-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
LLU|FUN_002040-T1
LLU|FUN_002041-T1SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
LLU|FUN_002042-T1
LLU|FUN_002043-T1
LLU|FUN_002044-T1
LLU|FUN_002045-T1
LLU|FUN_002046-T1
LLU|FUN_002047-T1
LLU|FUN_002048-T1
LLU|FUN_002049-T1
LLU|FUN_002050-T1PROTEIN CBG11604
LLU|FUN_002051-T1CALCIUM BINDING PROTEIN
LLU|FUN_002052-T1
LLU|FUN_002053-T1CALCIUM BINDING PROTEIN
LLU|FUN_002054-T1
LLU|FUN_002055-T1
LLU|FUN_002056-T1
LLU|FUN_002057-T1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
LLU|FUN_002058-T1CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
LLU|FUN_002059-T1
LLU|FUN_002060-T1
LLU|FUN_002061-T1UNCHARACTERIZED
LLU|FUN_002062-T1WD REPEAT-CONTAINING PROTEIN 11
LLU|FUN_002063-T1LRP2-BINDING PROTEIN
LLU|FUN_002064-T1
LLU|FUN_002065-T1
LLU|FUN_002066-T1
LLU|FUN_002067-T1
LLU|FUN_002068-T1
LLU|FUN_002069-T1
LLU|FUN_002070-T1
LLU|FUN_002071-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002072-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002073-T1
LLU|FUN_002074-T1
LLU|FUN_002075-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002076-T1
LLU|FUN_002077-T1
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