About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s003.g0234.t1
Lsat_s003.g0235.t1
Lsat_s003.g0236.t1G PROTEIN-COUPLED RECEPTOR 157-RELATED
Lsat_s003.g0237.t1G PROTEIN-COUPLED RECEPTOR 157-RELATED
Lsat_s003.g0238.t1
Lsat_s003.g0239.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Lsat_s003.g0240.t1
Lsat_s003.g0241.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Lsat_s003.g0242.t1
Lsat_s003.g0243.t1G PROTEIN-COUPLED RECEPTOR 157-RELATED
Lsat_s003.g0244.t1
Lsat_s003.g0245.t1
Lsat_s003.g0246.t1
Lsat_s003.g0247.t1
Lsat_s003.g0248.t1ATP-DEPENDENT RNA HELICASE DBP3
Lsat_s003.g0249.t1
Lsat_s003.g0250.t1
Lsat_s003.g0251.t1
Lsat_s003.g0252.t1SI:CH211-262H13.3-RELATED-RELATED
Lsat_s003.g0253.t1SH2 DOMAIN-CONTAINING PROTEIN
Lsat_s003.g0254.t1AUTOPHAGY PROTEIN 16-LIKE
Lsat_s003.g0255.t1RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING
Lsat_s003.g0256.t1
Lsat_s003.g0257.t1
Lsat_s003.g0258.t1EXPRESSED PROTEIN
Lsat_s003.g0259.t1
Lsat_s003.g0260.t1CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5
Lsat_s003.g0261.t1SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJO
Lsat_s003.g0262.t1
Lsat_s003.g0263.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s003.g0264.t1
Lsat_s003.g0265.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
Lsat_s003.g0266.t1
Lsat_s003.g0267.t1IRE1-RELATED
Lsat_s003.g0268.t1
Lsat_s003.g0269.t1
Lsat_s003.g0270.t1
Lsat_s003.g0271.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
Lsat_s003.g0272.t1
Lsat_s003.g0273.t1
Lsat_s003.g0274.t1
Lsat_s003.g0275.t1
Lsat_s003.g0276.t1
Lsat_s003.g0277.t1
Lsat_s003.g0278.t1AAA-FAMILY ATPASE
Lsat_s003.g0279.t1ANKYRIN REPEAT AND MYND DOMAIN PROTEIN 1
Lsat_s003.g0280.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s003.g0281.t1MUCIN-22
Lsat_s003.g0282.t1BCL-2 RELATED
Lsat_s003.g0283.t1PTB-CONTAINING, CUBILIN AND LRP1-INTERACTING PROTEIN
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