About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s003.g0184.t1
Lsat_s003.g0185.t1
Lsat_s003.g0186.t1DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Lsat_s003.g0187.t1RING FINGER PROTEIN 219
Lsat_s003.g0188.t1EPITHELIAL-STROMAL INTERACTION PROTEIN 1
Lsat_s003.g0189.t1NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
Lsat_s003.g0190.t1WD40 REPEAT PROTEIN
Lsat_s003.g0191.t1PHOSPHOLIPID SCRAMBLASE-RELATED
Lsat_s003.g0192.t1
Lsat_s003.g0193.t1TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11
Lsat_s003.g0194.t1DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Lsat_s003.g0195.t1
Lsat_s003.g0196.t1UNCHARACTERIZED
Lsat_s003.g0197.t1GLUTAMATE--TRNA LIGASE
Lsat_s003.g0198.t1HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3
Lsat_s003.g0199.t1
Lsat_s003.g0200.t1OPSIN
Lsat_s003.g0201.t1
Lsat_s003.g0202.t1
Lsat_s003.g0203.t1
Lsat_s003.g0204.t1OPSIN
Lsat_s003.g0205.t1LD39211P
Lsat_s003.g0206.t1
Lsat_s003.g0207.t1LD39211P
Lsat_s003.g0208.t1LD39211P
Lsat_s003.g0209.t1LIPOXYGENASE
Lsat_s003.g0210.t1
Lsat_s003.g0211.t1C13ORF1 PROTEIN-RELATED
Lsat_s003.g0212.t1
Lsat_s003.g0213.t1
Lsat_s003.g0214.t1
Lsat_s003.g0215.t1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Lsat_s003.g0216.t1
Lsat_s003.g0217.t1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Lsat_s003.g0218.t1
Lsat_s003.g0219.t1ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1
Lsat_s003.g0220.t1
Lsat_s003.g0221.t1
Lsat_s003.g0222.t1
Lsat_s003.g0223.t1
Lsat_s003.g0224.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s003.g0225.t1TETRASPANIN
Lsat_s003.g0226.t1
Lsat_s003.g0227.t1SLEI FAMILY PROTEIN
Lsat_s003.g0228.t1PROTEIN EIGER
Lsat_s003.g0229.t1PROTEIN EIGER
Lsat_s003.g0230.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Lsat_s003.g0231.t1
Lsat_s003.g0232.t1G PROTEIN-COUPLED RECEPTOR 157-RELATED
Lsat_s003.g0233.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
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