Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s003.g0184.t1 | |
Lsat_s003.g0185.t1 | |
Lsat_s003.g0186.t1 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Lsat_s003.g0187.t1 | RING FINGER PROTEIN 219 |
Lsat_s003.g0188.t1 | EPITHELIAL-STROMAL INTERACTION PROTEIN 1 |
Lsat_s003.g0189.t1 | NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED |
Lsat_s003.g0190.t1 | WD40 REPEAT PROTEIN |
Lsat_s003.g0191.t1 | PHOSPHOLIPID SCRAMBLASE-RELATED |
Lsat_s003.g0192.t1 | |
Lsat_s003.g0193.t1 | TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 |
Lsat_s003.g0194.t1 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Lsat_s003.g0195.t1 | |
Lsat_s003.g0196.t1 | UNCHARACTERIZED |
Lsat_s003.g0197.t1 | GLUTAMATE--TRNA LIGASE |
Lsat_s003.g0198.t1 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
Lsat_s003.g0199.t1 | |
Lsat_s003.g0200.t1 | OPSIN |
Lsat_s003.g0201.t1 | |
Lsat_s003.g0202.t1 | |
Lsat_s003.g0203.t1 | |
Lsat_s003.g0204.t1 | OPSIN |
Lsat_s003.g0205.t1 | LD39211P |
Lsat_s003.g0206.t1 | |
Lsat_s003.g0207.t1 | LD39211P |
Lsat_s003.g0208.t1 | LD39211P |
Lsat_s003.g0209.t1 | LIPOXYGENASE |
Lsat_s003.g0210.t1 | |
Lsat_s003.g0211.t1 | C13ORF1 PROTEIN-RELATED |
Lsat_s003.g0212.t1 | |
Lsat_s003.g0213.t1 | |
Lsat_s003.g0214.t1 | |
Lsat_s003.g0215.t1 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Lsat_s003.g0216.t1 | |
Lsat_s003.g0217.t1 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Lsat_s003.g0218.t1 | |
Lsat_s003.g0219.t1 | ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 |
Lsat_s003.g0220.t1 | |
Lsat_s003.g0221.t1 | |
Lsat_s003.g0222.t1 | |
Lsat_s003.g0223.t1 | |
Lsat_s003.g0224.t1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Lsat_s003.g0225.t1 | TETRASPANIN |
Lsat_s003.g0226.t1 | |
Lsat_s003.g0227.t1 | SLEI FAMILY PROTEIN |
Lsat_s003.g0228.t1 | PROTEIN EIGER |
Lsat_s003.g0229.t1 | PROTEIN EIGER |
Lsat_s003.g0230.t1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
Lsat_s003.g0231.t1 | |
Lsat_s003.g0232.t1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
Lsat_s003.g0233.t1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |