Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s003.g0034.t1 | URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10 |
Lsat_s003.g0035.t1 | |
Lsat_s003.g0036.t1 | SODIUM/HYDROGEN EXCHANGER |
Lsat_s003.g0037.t1 | ATP-BINDING CASSETTE SUB-FAMILY C |
Lsat_s003.g0038.t1 | CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN |
Lsat_s003.g0039.t1 | UNCHARACTERIZED |
Lsat_s003.g0040.t1 | BONUS, ISOFORM C-RELATED |
Lsat_s003.g0041.t1 | |
Lsat_s003.g0042.t1 | |
Lsat_s003.g0043.t1 | TRANSCRIPTION FACTOR DP |
Lsat_s003.g0044.t1 | |
Lsat_s003.g0045.t1 | |
Lsat_s003.g0046.t1 | |
Lsat_s003.g0047.t1 | POLYCYSTIN FAMILY MEMBER |
Lsat_s003.g0048.t1 | ZINC FINGER PROTEIN DZIP1 |
Lsat_s003.g0049.t1 | LD25575P |
Lsat_s003.g0050.t1 | |
Lsat_s003.g0051.t1 | FI21293P1 |
Lsat_s003.g0052.t1 | UNCHARACTERIZED |
Lsat_s003.g0053.t1 | POLYCYSTIN FAMILY MEMBER |
Lsat_s003.g0054.t1 | |
Lsat_s003.g0055.t1 | POLYCYSTIN FAMILY MEMBER |
Lsat_s003.g0056.t1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Lsat_s003.g0057.t1 | POLYCYSTIN FAMILY MEMBER |
Lsat_s003.g0058.t1 | POLYCYSTIN FAMILY MEMBER |
Lsat_s003.g0059.t1 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Lsat_s003.g0060.t1 | - |
Lsat_s003.g0061.t1 | DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED |
Lsat_s003.g0062.t1 | POLYCYSTIN FAMILY MEMBER |
Lsat_s003.g0063.t1 | |
Lsat_s003.g0064.t1 | SUCCINYL-COA SYNTHETASE BETA CHAIN |
Lsat_s003.g0065.t1 | CYSTEINE-RICH, ACIDIC INTEGRAL MEMBRANE PROTEIN-RELATED |
Lsat_s003.g0066.t1 | BTK-BINDING PROTEIN-RELATED |
Lsat_s003.g0067.t1 | UNCHARACTERIZED |
Lsat_s003.g0068.t1 | UNCHARACTERIZED |
Lsat_s003.g0069.t1 | |
Lsat_s003.g0070.t1 | UNCHARACTERIZED |
Lsat_s003.g0071.t1 | UNCHARACTERIZED |
Lsat_s003.g0072.t1 | UNCHARACTERIZED |
Lsat_s003.g0073.t1 | UNCHARACTERIZED |
Lsat_s003.g0074.t1 | UNCHARACTERIZED |
Lsat_s003.g0075.t1 | UNCHARACTERIZED |
Lsat_s003.g0076.t1 | ANTIGEN BSP, PUTATIVE-RELATED |
Lsat_s003.g0077.t1 | |
Lsat_s003.g0078.t1 | SYNOVIAL SARCOMA, X MEMBER |
Lsat_s003.g0079.t1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Lsat_s003.g0080.t1 | ANKYRIN REPEAT PROTEIN |
Lsat_s003.g0081.t1 | JITTERBUG, ISOFORM N |
Lsat_s003.g0082.t1 | ZINC FINGER PROTEIN |
Lsat_s003.g0083.t1 |