About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s003.g0034.t1URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10
Lsat_s003.g0035.t1
Lsat_s003.g0036.t1SODIUM/HYDROGEN EXCHANGER
Lsat_s003.g0037.t1ATP-BINDING CASSETTE SUB-FAMILY C
Lsat_s003.g0038.t1CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN
Lsat_s003.g0039.t1UNCHARACTERIZED
Lsat_s003.g0040.t1BONUS, ISOFORM C-RELATED
Lsat_s003.g0041.t1
Lsat_s003.g0042.t1
Lsat_s003.g0043.t1TRANSCRIPTION FACTOR DP
Lsat_s003.g0044.t1
Lsat_s003.g0045.t1
Lsat_s003.g0046.t1
Lsat_s003.g0047.t1POLYCYSTIN FAMILY MEMBER
Lsat_s003.g0048.t1ZINC FINGER PROTEIN DZIP1
Lsat_s003.g0049.t1LD25575P
Lsat_s003.g0050.t1
Lsat_s003.g0051.t1FI21293P1
Lsat_s003.g0052.t1UNCHARACTERIZED
Lsat_s003.g0053.t1POLYCYSTIN FAMILY MEMBER
Lsat_s003.g0054.t1
Lsat_s003.g0055.t1POLYCYSTIN FAMILY MEMBER
Lsat_s003.g0056.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s003.g0057.t1POLYCYSTIN FAMILY MEMBER
Lsat_s003.g0058.t1POLYCYSTIN FAMILY MEMBER
Lsat_s003.g0059.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s003.g0060.t1-
Lsat_s003.g0061.t1DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
Lsat_s003.g0062.t1POLYCYSTIN FAMILY MEMBER
Lsat_s003.g0063.t1
Lsat_s003.g0064.t1SUCCINYL-COA SYNTHETASE BETA CHAIN
Lsat_s003.g0065.t1CYSTEINE-RICH, ACIDIC INTEGRAL MEMBRANE PROTEIN-RELATED
Lsat_s003.g0066.t1BTK-BINDING PROTEIN-RELATED
Lsat_s003.g0067.t1UNCHARACTERIZED
Lsat_s003.g0068.t1UNCHARACTERIZED
Lsat_s003.g0069.t1
Lsat_s003.g0070.t1UNCHARACTERIZED
Lsat_s003.g0071.t1UNCHARACTERIZED
Lsat_s003.g0072.t1UNCHARACTERIZED
Lsat_s003.g0073.t1UNCHARACTERIZED
Lsat_s003.g0074.t1UNCHARACTERIZED
Lsat_s003.g0075.t1UNCHARACTERIZED
Lsat_s003.g0076.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s003.g0077.t1
Lsat_s003.g0078.t1SYNOVIAL SARCOMA, X MEMBER
Lsat_s003.g0079.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s003.g0080.t1ANKYRIN REPEAT PROTEIN
Lsat_s003.g0081.t1JITTERBUG, ISOFORM N
Lsat_s003.g0082.t1ZINC FINGER PROTEIN
Lsat_s003.g0083.t1
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